Query= MSMg01no430_l07.b1 MSMg01no430_l07.b1 CHROMAT_FILE:
MSMg01no430_l07.b1 PHD_FILE: MSMg01no430_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:41 2005
(418 letters)
>mm_chr10_24492991_24493804
Length = 814
Score = 712 bits (368), Expect = 0.0
Identities = 404/418 (96%), Gaps = 7/418 (1%)
Strand = Plus / Plus
Query: 1 atgtcccacaacataaaagtgcgcatttgccatgtcattcattgctgtatcttagtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtcccacaacataaaagtgcgcatttgccatgtcattcattgctgtatcttagtgatc 260
Query: 61 acgctgggaacaaccatagactccatagactggaggctctcagtagtcttcacacatgaa 120
||||||||||||||| || || |||||||||||||||||||||||||||||||| |||
Sbjct: 261 acgctgggaacaacc-tacac---atagactggaggctctcagtagtcttcacacacgaa 316
Query: 121 ggcatccattgcaaagggaaaaggctggtgtacagagcagagtctgtagccaccagctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggcatccattgcaaagggaaaaggctggtgtacagagcagagtctgtagccaccagctca 376
Query: 181 tccttgtgagcactgtggctcagtacacacaaatcaacaccatgcatttctgccaaatac 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 377 tccttgtgagcactgtggctcagtacacacaaatcaacaccatgcgtttctgccaaatac 436
Query: 241 tgacaaatgtcaccagctctaaaggactctgcacccgccctcttccagcctccttgggca 300
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 437 tgacaaatgtcaccagctctataggactctgcgcccgccctcttccagcctccttgggca 496
Query: 301 ccttgggcacacatgtgtgtatatacaaggggaggagggcagaagaataaataaaattaa 360
| | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 c-tag--cacacatatgtgtatatacaaggggaggagggcagaagaataaataaaattaa 553
Query: 361 atgaaatgtcttctaatgtctatagaaatgaataagacagattgtaatgaaaatgtat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atgaaatgtcttctaatgtctatagaaatgaataagacagattgtaatgaaaatgtat 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 814
Length adjustment: 9
Effective length of query: 409
Effective length of database: 805
Effective search space: 329245
Effective search space used: 329245
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_l07.g1 MSMg01no430_l07.g1 CHROMAT_FILE:
MSMg01no430_l07.g1 PHD_FILE: MSMg01no430_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:41 2005
(422 letters)
>mm_chr10_24607916_24608737
Length = 822
Score = 766 bits (396), Expect = 0.0
Identities = 418/430 (97%), Gaps = 8/430 (1%)
Strand = Plus / Minus
Query: 1 tagacaagtcagacaacatgtgagaccctgcctta--------aaacaaacaaacaaaca 52
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 688 tagacaagtcagacaacatgtgagaccctgccttaaaacaaacaaacaaacaaacaaaca 629
Query: 53 aacaaaactaaacaaaagcaacattagggatctgctttctgtcccctcggaagccaggag 112
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 628 aacaaaactaaacaaaagcaacattagggatctgccttctgccccctcggaagccaggag 569
Query: 113 ccgggagtgctcaaagccaactaagccacactaaggagcagcaggatcagctctgaggag 172
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 568 ccgggagtgctcaaagccaactaagccacactaaggagcagcaggattggctctgaggag 509
Query: 173 gcgccctttggtcataccttctggtggagagagaggaccatatgtgggaaactggcaaac 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gcgccctttggtcataccttctggtggagagagaggaccatatgtgggaaactggcaaac 449
Query: 233 tggaaaagcacaaagaaaatgagctggctggaaaggtgctgccacaggagctggctggtt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tggaaaagcacaaagaaaatgagctggctggaaaggtgctgccacaggagctggctggtt 389
Query: 293 cccccatcgtcaaacttctcctcggtctctgacctctccatggcgtacaccaccaggtcc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cccccatcgtcaaacttctcctcggtctctgacctctccatggcgtacaccaccaggtcc 329
Query: 353 accaactggtcctccagcacagggcagcgctgcttgtgctgtaggcagagattacataca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 accaactggtcctccagcacagggcagcgctgcttgtgctgtaggcagagattacataca 269
Query: 413 gtattccaaa 422
||||||||||
Sbjct: 268 gtattccaaa 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
