Query= MSMg01no430_o21.b1 MSMg01no430_o21.b1 CHROMAT_FILE:
MSMg01no430_o21.b1 PHD_FILE: MSMg01no430_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:02 2005
(392 letters)
>mm_chr10_86196406_86197197
Length = 792
Score = 636 bits (329), Expect = 0.0
Identities = 376/399 (94%), Gaps = 15/399 (3%)
Strand = Plus / Plus
Query: 5 gaattctctagcagatacgagcaaacatgcaggacagctgttgcccaagttaaaggagac 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gaattctctagcagagatgagcaaacatgcaggacagctgttgcccaagttaaaggagac 257
Query: 65 ctgacttcagtggctgagca-cccaggggttattcctttatggagtggacttgagtttt- 122
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgacttcagtggctgagcaccccaggggttattcctttatggagtggacttgagttttc 317
Query: 123 ----cagaaagttaccatggcggcagcagcagctgctgctgcttctgctcttcctcctcc 178
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 318 cttccagaaagttaccatggcggcagcagctgctgctgctgcttctgctcttcctcct-- 375
Query: 179 ccccccccc-----tttttttccccacaaggtctggaacttgctctataaaccaggctgg 233
|| || | ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 376 --cctcctctttttttttttttcccacaagatctggaacttgctctataaaccaggctgg 433
Query: 234 cctcaaactcagagatctgcctgcctctgcctcccaagggctggaatcagagggcgtgat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cctcaaactcagagatctgcctgcctctgcctcccaagggctggaatcagagggcgtgat 493
Query: 294 caactgttgctgccactactaccaccacctagctcaccatagcatcttctaaaaaaaacg 353
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 caactgttgctgccactaccaccaccacctagctcaccatagcatcttctaaaaaaaacg 553
Query: 354 atctcgttttaattacaagcaattagtttgggatctcac 392
|||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atctcgttttaattacaagcaattagtttgggatctcac 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_o21.g1 MSMg01no430_o21.g1 CHROMAT_FILE:
MSMg01no430_o21.g1 PHD_FILE: MSMg01no430_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:02 2005
(403 letters)
>mm_chr10_86366696_86367498
Length = 803
Score = 567 bits (293), Expect = e-166
Identities = 302/305 (99%)
Strand = Plus / Minus
Query: 1 tcagaaggaaaaattattttttaaatatgatttaagagtcaacaaagagccaggtattat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 305 tcagaaggaaaaattattttttaaatatgatttaagagtcaataaagagccaggtattat 246
Query: 61 gtgcctgtaatcctaggactatgaaggccatcttaaggaggtttaaaaatggcatgacca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtgcctgtaatcctaggactatggaggccatcttaaggaggtttaaaaatggcatgacca 186
Query: 121 aaaagtaacttggagaaaagggtttatttcactttatgctttcaggtaacagtccatcac 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaaagtaacttggagaaaaaggtttatttcactttatgctttcaggtaacagtccatcac 126
Query: 181 tgaaagagtgtaaggcaggacctgaagcagaggccacagaggaatgctgcttactggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tgaaagagtgtaaggcaggacctgaagcagaggccacagaggaatgctgcttactggctt 66
Query: 241 gcttctggcatgctcagtttcttttcttatacacctgaggaccacctgcccaggcgtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gcttctggcatgctcagtttcttttcttatacacctgaggaccacctgcccaggcgtggt 6
Query: 301 accac 305
|||||
Sbjct: 5 accac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
