XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAAACCCGCGGAATTCA
TCAAAAATTACAAGAGATTGTTGTTGGGGGTGTGAAGAAATGGGGAGCCT
CAGATGCTATGGGCAGGAATGTGAACTGGTATGGAAGACATATGGAGGGT
GCTCAAGGCATTAAAGACCAACCTAGTAAATCGCTCAACAATCACAGATG
AGACGTGTGTTAGAGCGCTGTCTGCTGTCCTATGTTCATTGCAGTATTAG
TCATAGTAGTTAGGACTTAGGAACACACACAATAACTATGTTTAAAATGT
GCATATTTATAGTCTATAATGNTTACTTTTTAACCAAATATATACTGAGC
AATGACTAAATCCAACAAATTTACATCTGTATTCATTCATAGAGTTACTG
AATGAAAAGCGGCGCCCCGGGGGGGAAAGAAAGGGAAAAGGCAGGGACCT
GACTGCTCCTGTGTATGACGTATCGATAATATTTATTATCCATAGATGTT
AGAGCCTATTTTCACTTTTGCTTGCCTGTTCTAATCCCTATTTTACTTGC
CCTTCTTATTTCCTCCTGCTGCCTTTCTTTCTTCCCTTCCTCTTTTCCTC
TTTCTAACCTTTTCACCTTCCCTTTTTTTTTCCTCTTTTCCCCTTACTTC
TTTTTTCTTCCTTTGCCCAAACCCTCTTTTTACCTTTTCCTCTCCTCACA
CCCATTTTCTTTTTTTCTTCCTTTTTCTCCCCTTTATCCTTGTN

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTATTCCTTGTAGTAAGAACATCTGAGCATCAA
AGATCAAAGAACACTGACATTTGATCTGAACACCAACACAGTAGAACCCA
GTCAGAGAAAGGATTGCAATTATAAGGTTTCAGATAGCTATTCTATGGAT
TAAATCCTGCTGCCCAAAATAAACAATACCAAAAATTCTTCCTTGATATA
GTCAGTGGGTAAGGTGTGTGTCATTCCTCCAGCAGTGGATATATAGGTGC
TTTGCTGATGAAAATCTGTTTGTTTTTGTGCAACTATTTAAAAACTCCTT
TTGTATTTTTTAATATGTGCATTCTGATTTCTTATTCACATCTTAAAGAA
GCCCTTAAATTATAACCCGAAGGGCATTAAGGATGCTTGTCTTCTTAGTT
ACACTCGCGTTTCCACTTTCTAGAAAAAGCCAAATACTTTGAGCTCTGAT
AATGCCTCTCACTTCTTTTGTATTGTATTGTACTCTTGCACCCTAGTTTT
TTTCTTTTTCCGCTCTTCTCCCTTATGTTTATTCTGACTTATTCCCTTAC
TCCCATCACATTCCTTTCTGGTTTTTTTTTTTCCTACCTCCATCCTTTCC
TAGTTACTAGATTTTCTTACCTCACCCTTCCTTTTCTTTTATTCCTTCCT
TTTCCCTTGTCTCTCTTTCTCTTATTTTTTTTTCTTCCCTTCCTTC

Query= MSMg01no431_c06.b1 MSMg01no431_c06.b1 CHROMAT_FILE:
MSMg01no431_c06.b1 PHD_FILE: MSMg01no431_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:19 2005
         (248 letters)



>mm_chr10_36616361_36617008
          Length = 648

 Score =  441 bits (228), Expect = e-128
 Identities = 243/248 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgttgttgggggtgtgaagaaatggggagcctcagatgctatgggcaggaatgtgaact 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttgttgttgggggtgtgaaggaatggggagcctcagatgctatgggcaggaatgtgaact 275

                                                                       
Query: 61  ggtatggaagacatatggagggtgctcaaggcattaaagaccaacctagtaaatcgctca 120
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 ggtatggaagacatatggagggtgctcaagacattaaagaccaacctagtaaatcgctca 215

                                                                       
Query: 121 acaatcacagatgagacgtgtgttagagcgctgtctgctgtcctatgttcattgcagtat 180
           |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 214 acaatcacagatgaaacgtgtgttagagcgctgtctgcagtcctatgttcattgcagtat 155

                                                                       
Query: 181 tagtcatagtagttaggacttaggaacacacacaataactatgtttaaaatgtgcatatt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 154 tagtcatagtagttaggacttaggaacacacacaataactatgtttaaaatgtgtatatt 95

                   
Query: 241 tatagtct 248
           ||||||||
Sbjct: 94  tatagtct 87


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space:   152721
Effective search space used:   152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no431_c06.g1 MSMg01no431_c06.g1 CHROMAT_FILE:
MSMg01no431_c06.g1 PHD_FILE: MSMg01no431_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:19 2005
         (343 letters)



>mm_chr10_36438159_36438901
          Length = 743

 Score =  601 bits (311), Expect = e-176
 Identities = 335/343 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattccttgtagtaagaacatctgagcatcaaagatcaaagaacactgacatttgatctg 60
           ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 201 tattccttgtagtaagagcatctgagcattaaagatcaaagaatactgacatttgatctg 260

                                                                       
Query: 61  aacaccaacacagtagaacccagtcagagaaaggattgcaattataaggtttcagatagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaccaacacagtagaacccagtcagagaaaggattgcaattataaggtttcagatagc 320

                                                                       
Query: 121 tattctatggattaaatcctgctgcccaaaataaacaataccaaaaattcttccttgata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 tattctatggattaaatcctgctgcccaaaataaacaataccaaaaattcttccttggta 380

                                                                       
Query: 181 tagtcagtgggtaaggtgtgtgtcattcctccagcagtggatatataggtgctttgctga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtcagtgggtaaggtgtgtgtcattcctccagcagtggatatataggtgctttgctga 440

                                                                       
Query: 241 tgaaaatctgtttgtttttgtgcaactatttaaaaactccttttgtattttttaatatgt 300
           |||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tgaaaatctgcttggttttgtgcaactattaaaaaactccttttgtattttttaatatgt 500

                                                      
Query: 301 gcattctgatttcttattcacatcttaaagaagcccttaaatt 343
           ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 gcattctgatttcttattcacatcttaaagaggcccttaaatt 543


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space:   245156
Effective search space used:   245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)