Query= MSMg01no431_d01.b1 MSMg01no431_d01.b1 CHROMAT_FILE:
MSMg01no431_d01.b1 PHD_FILE: MSMg01no431_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:23 2005
(532 letters)
>mm_chr10_15693551_15694474
Length = 924
Score = 824 bits (426), Expect = 0.0
Identities = 499/526 (94%), Gaps = 8/526 (1%)
Strand = Plus / Minus
Query: 3 tgcattgacattcttgacatttagagactcattttttttccccaccgtctggcaatgtaa 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 720 tgcattgacattcttgacatttagagactcatttttttt-cccaccgtctggcaatgtaa 662
Query: 63 ttatcttgctaacatatagaatctaaatgtcttgtcagaactagccctgtaaaatgccta 122
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 661 ttatcttgctaacatatagaatctaagtgtcttgtcagaactagccctgtaaaatgccca 602
Query: 123 ctggcaatctcagtctacttattttctgtctggcccaatttgtttttctttctccccagt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctggcaatctcagtctacttattttctgtctggcccaatttgtttttctttctccccagt 542
Query: 183 aattgatttaaaaactctagccaattgtaataaactgctctgcctctgtacattgttaca 242
|||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 541 aattgatttaaacactctaaccaattgtaataaactgttctgcctctgtacattgttaca 482
Query: 243 agctattctcatttacagtatctctctttgaaacaattcatggtttctgagcctagcttg 302
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 481 agctattctcatttacagtatctctctttgaaacaattcatggtttcagaacctagcttg 422
Query: 303 tattttaatgggactctacttatttgtctcttcattttttttttttagtctctttattac 362
||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||
Sbjct: 421 tattttaatgggact--acttatttgtctcttcattttctttt---agtctctttacaac 367
Query: 363 tctgggatgaaactgaatttctgagaccattatttgtttgagcttcattacaaattaggc 422
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 366 tccgggatgaaactgaatttctgagaccattatttgtttgagtttcattacaaattaggc 307
Query: 423 tcttaacaacaataaattaagaaaattgagagaatacgttcctttatagattttttttga 482
||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||
Sbjct: 306 tcttaacaacaataaattaagaaaattgagagaattcattcttttatagatttttt--ga 249
Query: 483 taaattatataataagtaatgcgctttcttatatattattatatta 528
||||||| |||||| |||||| | ||||||||||||||||||||||
Sbjct: 248 taaattacataataggtaatgtgttttcttatatattattatatta 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 924
Length adjustment: 10
Effective length of query: 522
Effective length of database: 914
Effective search space: 477108
Effective search space used: 477108
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_d01.g1 MSMg01no431_d01.g1 CHROMAT_FILE:
MSMg01no431_d01.g1 PHD_FILE: MSMg01no431_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:23 2005
(329 letters)
>mm_chr10_15561365_15562093
Length = 729
Score = 586 bits (303), Expect = e-172
Identities = 321/327 (98%)
Strand = Plus / Plus
Query: 1 tatgtccagaagtgctttcaggttaatctcataggagttttattggaatcattacatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgtccagaagtgctttcaggttaatctcataggagttttattggaatcattacatttt 260
Query: 61 tgtagagctgtgttgtcttaaaattttcagatactggtagtgtgcagggaattgtacatt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 tgtagagctgtgttgtcttaaaattttcagatacttgtagtgtgcagggaattgtacatt 320
Query: 121 tgttgttagttgtttgaatgagagtgtgggccagaacctgatgatatgggctcactctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgttagttgtttgaatgagagtgtgggccagaacctgatgatatgggctcactctca 380
Query: 181 gtgacaagaacttggaaatctataggagaatatttatggaagatgggtggacagtagaag 240
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gtgacaagaacctggaaatctataggagaatatttatggaagatgggtggacaggagaag 440
Query: 241 tttaagttcattacttggtacctagtgcgcccttacatgtcatgctatactaagtaagtc 300
||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||
Sbjct: 441 tttaagttcattacttggtgcctagggtgcccttacatgtcatgctatactaagtaagtc 500
Query: 301 aggaatatattcacatagattaatagg 327
|||||||||||||||||||||||||||
Sbjct: 501 aggaatatattcacatagattaatagg 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
