Query= MSMg01no431_e15.b1 MSMg01no431_e15.b1 CHROMAT_FILE:
MSMg01no431_e15.b1 PHD_FILE: MSMg01no431_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:32 2005
(521 letters)
>mm_chr10_98699929_98700852
Length = 924
Score = 959 bits (496), Expect = 0.0
Identities = 514/524 (98%), Gaps = 10/524 (1%)
Strand = Plus / Plus
Query: 7 gaattc-acagtgctcgggcaggcagcgatgtgctcaatgggctgtgttgtcccctcaac 65
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaacagtgctcgggcaggcagcgatgtgctcaatgggctgtgttgtcccctcaac 266
Query: 66 aaaaactcacaggacacgagcggacagaagcctctctgagtcagagcccactgcctgctt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaaactcacaggacacgagcggacagaagcctctctgagtcagagcccactgcctgctt 326
Query: 126 gtcctttgtcctttgagccaataaatacagtaacacccagacctataatatcttatctgc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtcctttgtcctttgagccaataaatacagtaacacccagacctataatatcttatctgc 386
Query: 186 agaaaaatacgacagtggcagagctatgcacctaatctctgagccagcctctacaagagc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agaaaaatacgacagtggcagagctatgcacctaatctctgagccagcctctacaagagc 446
Query: 246 tttctagaaccttggaattgagggactcatttttgagatgaaaaaaaaaaaaaaaa---g 302
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 447 tttctagaaccttggaattgagggactcatttttgagatg-aaaaaaaaaaaaaaaaaag 505
Query: 303 aaatgttgataatcttgttggagtcttcttcagcttctcattttatatatcttggaaatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaatgttgataatcttgttggagtcttcttcagcttctcattttatatatcttggaaatt 565
Query: 363 ggttacctaaaaggaaaaccaaactggtagtgttttaaataagcatttgagtcatacatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggttacctaaaaggaaaaccaaactggtagtgttttaaataagcatttgagtcatacatg 625
Query: 423 gaatagcatatcttatccagtgacttatttttattttaaaaattatatttgagataggat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaatagcatatcttatccagtgacttatttttattttaaaaattatatttgagataggat 685
Query: 483 cttgctttttttttttttt-----ggtagccctacattgaatta 521
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 686 cttgctttttttttttttttttttggtagccctacattgaatta 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 924
Length adjustment: 10
Effective length of query: 511
Effective length of database: 914
Effective search space: 467054
Effective search space used: 467054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_e15.g1 MSMg01no431_e15.g1 CHROMAT_FILE:
MSMg01no431_e15.g1 PHD_FILE: MSMg01no431_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:32 2005
(471 letters)
>mm_chr10_98882239_98883107
Length = 869
Score = 694 bits (359), Expect = 0.0
Identities = 410/429 (95%), Gaps = 5/429 (1%)
Strand = Plus / Minus
Query: 46 agaaaacacatcaggagtagtcactagcaaaggtttcaagaaaataagggaatgagcctt 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 agaaaacacatcaggagtagtcactagcaaaggtttcaagaaaataagggaatgagcctt 810
Query: 106 tcctaggggtgaacctctctttactgggttactcaatacaaagtggtctgccctgaaacc 165
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tcctaggggtgaacccctctttactgggttactcaatacaaagtggtctgccctgaaacc 750
Query: 166 agatacatacaaac---aaaaaccgactcaacagcttatatgtatatgtttgtgcatacg 222
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 749 agatacatacaaacaataaaaactgactcaacagcttatatgtatatgtttgtgcatacg 690
Query: 223 tatacacgtatatgcatataacaatagcaatcgaagaaaagagggtatcagtttggaggt 282
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 689 tatacatgtatatgcatataacaatagcaatcaaagaaaagagggtatcagtttggaggt 630
Query: 283 ggggcagaaaaaagaactctcaggaagcatgggaggagatggagtggggtaccccagaag 342
| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 629 gaggcag--aaaagagctctcaggaagcatgcgaggagatggagtggggtaccccagaag 572
Query: 343 tgccggaaggagaaaaggggaaaataatgtggctctgttttaattttaaaaatgtattaa 402
|||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 571 tgccagaaggagaaaaggagaaaataatgtggctctgttttaatttttaaaatgtattaa 512
Query: 403 cttttctttagaaagaaaatatactaagtgtgaagtgtgtgtgtgactgtgacatacagc 462
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
Sbjct: 511 cttttctttagaaagaaaatatactaagtgtctagtgtgtgtctgactgtgacatacaac 452
Query: 463 acattcaaa 471
|||||||||
Sbjct: 451 acattcaaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 869
Length adjustment: 10
Effective length of query: 461
Effective length of database: 859
Effective search space: 395999
Effective search space used: 395999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
