Query= MSMg01no431_g18.b1 MSMg01no431_g18.b1 CHROMAT_FILE:
MSMg01no431_g18.b1 PHD_FILE: MSMg01no431_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:43 2005
(431 letters)
>mm_chr10_64999414_65000245
Length = 832
Score = 748 bits (387), Expect = 0.0
Identities = 418/431 (96%), Gaps = 8/431 (1%)
Strand = Plus / Minus
Query: 4 ggaattctctgaa-gttaagcatagaatctcattaaaggagtaatgtgactgactaccta 62
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggaattctctgaaggaaaagcatagaatctcattaaaggagtaatgtgactgactaccta 404
Query: 63 tctatttagtatggcttatgctgattcataggggttgtcccttagtcaggtcattgattc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tctatttagtatggcttatgctgattcataggggttgtcccttagtcaggtcattgattc 344
Query: 123 tatccagacattatttggtctctctccatccagacaagagatcctatgttcttgaccagg 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tacccagacattatttggtctctctccatccagacaagagatcctatgttcttgaccagg 284
Query: 183 agtttgtctcctcaaaggtttcttttgctgctttatcttaagcatccttactcgatacct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 283 agtttgtctcctcaaaggtttcttttgctgctttatcttaagcatccttactccatacct 224
Query: 243 atgaaactaacatttgtgtgtatatatacgtgtatatgctatatatgtgtatattatata 302
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 223 atgaaactaacatttgtgtgtatatatacgtgtatatgc-atatatgtgtatattatata 165
Query: 303 taatgtatatataat----atacatgcatattaaatgcatgcatatataatatgcataca 358
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 taatgtatatataatatacatacatgcatattaaatgcatgcatatataatatgcataca 105
Query: 359 ttatatgtatgcatgtataatatacacacatgc--tatatatatacatagtatatgtata 416
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 104 ttatatgtatgcatgtataatatacacacatgctatatatatatacatagtatatatata 45
Query: 417 tatatatatat 427
|||||||||||
Sbjct: 44 tatatatatat 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_g18.g1 MSMg01no431_g18.g1 CHROMAT_FILE:
MSMg01no431_g18.g1 PHD_FILE: MSMg01no431_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:43 2005
(292 letters)
>mm_chr10_64791999_64792688
Length = 690
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 1 actcacaagtgttcattccttcacacaagccattccaatgtaaataagtaagtaatgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcacaagtgttcattccttcacacaagccattccaatgtaaataagtaagtaatgtaa 260
Query: 61 gttagtaagcctaagtaaagcctgtgaggtgtttgcactgtgccaattgattgctttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttagtaagcctaagtaaagcctgtgaggtgtttgcactgtgccaattgattgctttgtt 320
Query: 121 tcatgtctctagttgtatactccagtaaaacctggtgtataaattggtggctgagtgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatgtctctagttgtatactccagtaaaacctggtgtataaattggtggctgagtgaag 380
Query: 181 cagtcacttttagtcctgaacttcaagtcactaaagatatgctttatttggaattataag 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 381 cagtcacttttagtcctgaacttcaagtcactaaag-tatgctttatttggaatt-taag 438
Query: 241 tgtcataattctcttgtataaatatgagaagagagaagggttttgtgttgac 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgtcataattctcttgtataaatatgagaagagagaagggttttgtgttgac 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 690
Length adjustment: 9
Effective length of query: 283
Effective length of database: 681
Effective search space: 192723
Effective search space used: 192723
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
