Query= MSMg01no431_h21.b1 MSMg01no431_h21.b1 CHROMAT_FILE:
MSMg01no431_h21.b1 PHD_FILE: MSMg01no431_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:49 2005
(376 letters)
>mm_chr10_28291960_28292731
Length = 772
Score = 623 bits (322), Expect = 0.0
Identities = 357/372 (95%), Gaps = 4/372 (1%)
Strand = Plus / Minus
Query: 5 gaattcttcatgatatacatcgatctgcttgttgtctgctctcaatggccaacatgccac 64
||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaattcttcttgataaagatcgatctgcttgttgtctgctctcaatggccaacatgccac 437
Query: 65 aggtgagttgaaaataatattgatggcatgatagagttaagtaggtttctgtgaaatttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aggtgagttgaaaataatattgatggcatgatagagttaagtaggtttctgtgaaatttg 377
Query: 125 ttaagatttgtctgtatttggtatgggcagctctgtacagacagtgcgtgtgcaacatgc 184
||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||
Sbjct: 376 ttaagatttgtctgtatttggtatgggcagctcagtacagacagtgtgtgtggaacatgc 317
Query: 185 gggcaggaggtagtctctgaccagggatgtaataagtgtacatcattctactataaatac 244
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gggcagg----agtctctgaccagggatgtaataagtgtacatcattctactataaatac 261
Query: 245 caaaaaattatctctccttttttgggggaggagatggtgggggaggacagagtcttcnng 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 caaaaaattatctctccttttttgggggaggagatggtgggggaggacagagtcttcagg 201
Query: 305 ntcttactantcctgactggcctggaacttactacatatcagcataacgggctggcatca 364
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gtcttattagtcctgactggcctggaacttactacatatcagcataacgggctggcatca 141
Query: 365 aactcaaagaga 376
||||||||||||
Sbjct: 140 aactcaaagaga 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 772
Length adjustment: 9
Effective length of query: 367
Effective length of database: 763
Effective search space: 280021
Effective search space used: 280021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_h21.g1 MSMg01no431_h21.g1 CHROMAT_FILE:
MSMg01no431_h21.g1 PHD_FILE: MSMg01no431_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:49 2005
(420 letters)
>mm_chr10_28144048_28144867
Length = 820
Score = 812 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Plus
Query: 1 atttttaaaattatttagaaaaatcctaattactgttggaactttaaaagacaactttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttttaaaattatttagaaaaatcctaattactgttggaactttaaaagacaactttag 260
Query: 61 aaactggagataaggctgcccttatagaagagttatactaaggaatatgggtatgcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactggagataaggctgcccttatagaagagttatactaaggaatatgggtatgcttga 320
Query: 121 atggggaagtaggactagatacagccctacaagtaagatatggtttactctgtcttttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggggaagtaggactagatacagccctacaagtaagatatggtttactctgtcttttgt 380
Query: 181 tgggatcaccagggaatattcacacttgccgtcacaatagtattattatgagacccttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggatcaccagggaatattcacacttgccgtcacaatagtattattatgagacccttca 440
Query: 241 gagccagcaagtagaactcatgtttttccaaagtattggaattttatgttttctaatatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagccagcaagtagaactcatgtttttccaaagtattggaattttatgttttctaatatc 500
Query: 301 tatctatgaaagatatgtatactattatagaaaataaatgataaggatttctcataaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatctatgaaagatatgtatactattatagaaaataaatgataaggatttctcataaata 560
Query: 361 tgtaaaaatatttaatatattatttttaaatacttaaaaatttccaatattagttataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtaaaaatatttaatatattatttttaaatacttaaaaatttccaatattagttataaa 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
