Query= MSMg01no431_i17.b1 MSMg01no431_i17.b1 CHROMAT_FILE:
MSMg01no431_i17.b1 PHD_FILE: MSMg01no431_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:54 2005
(479 letters)
>mm_chr10_126030762_126031639
Length = 878
Score = 837 bits (433), Expect = 0.0
Identities = 460/469 (98%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 11 tggggttctgttttgtttttatctcaaagcaatagaacctgcgtttctgataaaaggaaa 70
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tggggttctgttttgtttttagctcaaagcaatagaacctgcgtttctgataaaaggaaa 270
Query: 71 agaaatggagaaaattgaaccttacttttaagttgggatttgaaaaactggtagctagta 130
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agaaatggagaaaattgaacgttacttttaagttgggatttgaaaaactggtagctagta 330
Query: 131 gtgatgttattgaggcataagatctgaagagaataagttggggaaagaggtcaagctaaa 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 331 gtgatgttattgaggcataagatctgaagagaataagttggggaaagaggtcaa-ctaaa 389
Query: 191 gggccattagaaaaccagcggttcttctctgaagaaaactatttcccccgtcctcagaat 250
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gggccattaggaaaccagcggttcttctctgaagaaaactatttcccccgtcctcagaat 449
Query: 251 tctttagtcacctgtaatctttaaggttgaaccctcaaggtctttctccagtccacttcc 310
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 450 tctttagtcacctgtaatctttaaggttgaaccctcaaggtctttctccggtccacttcc 509
Query: 311 ggttgtccttggttgttgtccttgatgagcttgtaggcagtcgcattagtaagactttat 370
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 510 ggttgtccgtggttgttgtccttgatgagcttgtaggcagtcacattagtaagactttat 569
Query: 371 gggtatagcctctgtctgacattagtaggcaacacagtctcataacaaactctgtgctcc 430
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 570 gggtatagcctctgtctgacattagtaggcaacacagtctcataacaaactgtgtgctcc 629
Query: 431 tctggctattgcagtctttctgccctcttttctacaatgatccctggac 479
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 630 tctggctattgcggtctttctgccctcttttctacaatgatccctggac 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 878
Length adjustment: 10
Effective length of query: 469
Effective length of database: 868
Effective search space: 407092
Effective search space used: 407092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_i17.g1 MSMg01no431_i17.g1 CHROMAT_FILE:
MSMg01no431_i17.g1 PHD_FILE: MSMg01no431_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:54 2005
(481 letters)
>mm_chr10_126212863_126213744
Length = 882
Score = 849 bits (439), Expect = 0.0
Identities = 472/483 (97%), Gaps = 3/483 (0%)
Strand = Plus / Minus
Query: 1 ttctatggaatgtgtaatacataaaaatatccaaatgactgaacatttgtgaggaataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttctatggaatgtgtaatacataaaaatatccaaatgactgaacatttgtgaggaataca 623
Query: 61 ttgctctgagaaactgttgaagttgcctctatgtgaaaaagcggaggcaacagacgaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgctctgagaaactgttgaagttgcctctatgtgaaaaagcggaggcaacagacgaaac 563
Query: 121 agactaaagagaaccgcgctgccttggtccctgcttgctgctagacttacctggagcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agactaaagagaaccgcgctgccttggtccctgcttgctgctagacttacctggagcttt 503
Query: 181 ttaagagcaccaaccatacaaagcaacatctgtttgacagatttccttttgtcctggagc 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttaaaagcgccaaccatacaaagtaacatctgtttgacagatttccttttgtcctggagc 443
Query: 241 ccagcacctcgttctagcccactgggcttgcttattggaaagtttgcgtgaattccaggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 442 ccagcacctcgttctagcccactgggcttgcttattggaaagtttgcgtggattccaggg 383
Query: 301 aagcacagatgggtttatttactgtgttgcttgtgaaacttgtgtttcttgggacgacct 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 382 aagcacagatgggtttatttaccgtgttgcttgtgaaacttgtgtttcttgggacaacct 323
Query: 361 gtttagatgaaggcagcggtccttggggttgacgtgag-ggtggcaacgtccaccc-ctg 418
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 322 gtttagatgaaggcagcggtccttggggttgacgtgagaggtggcaacgtccacccac-g 264
Query: 419 gcaagcagtgaatgatgcgcattgttacagccacaggacggaacacgttctattactgac 478
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 263 gcaagcagtgaatgatgcgcattgttacagccgcaggacggaacacgttctatgactgac 204
Query: 479 tcg 481
|||
Sbjct: 203 tcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space: 410712
Effective search space used: 410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
