Query= MSMg01no432_l12.b1 MSMg01no432_l12.b1 CHROMAT_FILE:
MSMg01no432_l12.b1 PHD_FILE: MSMg01no432_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:33 2005
(476 letters)
>mm_chr10_18019397_18020272
Length = 876
Score = 899 bits (465), Expect = 0.0
Identities = 471/473 (99%)
Strand = Plus / Minus
Query: 4 ggaattctaaacctatccatgtttgctaatcttggctacgaaagagaaaaaagaatctca 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggaattctaaacctagccatgtttgctaatcttggctacgaaagagaaaaaagaatctca 617
Query: 64 tgcggcagcctagtactcaaagccgcttagatttttgtggtccaccgtcaacacctcaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgcggcagcctagtactcaaagccgcttagatttttgtggtccaccgtcaacacctcaat 557
Query: 124 tatactagaaccaaccaggcagcccaagagacatgtggagcataagtctgagaagctata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatactagaaccaaccaggcagcccaagagacatgtggagcataagtctgagaagctata 497
Query: 184 attttatctctggatttctgcttctctacactacagtggtttagtttacatgatctgcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attttatctctggatttctgcttctctacactacagtggtttagtttacatgatctgcag 437
Query: 244 gttccaaattatgtctttgagtgtactgaagacatcagctccagattcgcttagccaccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gttccaaattatgtctttgagtgtactgaagacatcagctccagattcgcttagccaccc 377
Query: 304 agcacacggctgccagagctgtgggtggcaataccatgtcaggtatagcaaaccagcaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agcacacggctgccagagctgtgggtggcaataccatgtcaggtatagcaaaccagcaaa 317
Query: 364 gactacatatgtatgccttggataactttgcccacaagcccacgggaccaaatactatgc 423
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 316 gactacatatgtatgccttggataactttgcccacaagcccatgggaccaaatactatgc 257
Query: 424 tctgtctgcaaacttgtttgtacttgaattgttttcccagctccatataaatc 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tctgtctgcaaacttgtttgtacttgaattgttttcccagctccatataaatc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_l12.g1 MSMg01no432_l12.g1 CHROMAT_FILE:
MSMg01no432_l12.g1 PHD_FILE: MSMg01no432_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:33 2005
(130 letters)
>mm_chr10_17853732_17854261
Length = 530
Score = 224 bits (116), Expect = 1e-63
Identities = 123/126 (97%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 1 tgcagttgccatgtgaagaagctaggatgtttgcttctgctcctgagtaagaaacaaaaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tgcagttgccatgtgaagaagctaggatgcttgcttctgctcctgagtaagaaacaaaaa 260
Query: 61 gcctgggccaccacctccctgctggcttcttgtttgtttgctttgtgtgggtgtgtgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gcctgggccaccacctccctgctggcttcttgtttgtttgctttgtgtg--tgtgtgtgt 318
Query: 121 gggggg 126
||||||
Sbjct: 319 gggggg 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 530
Length adjustment: 8
Effective length of query: 122
Effective length of database: 522
Effective search space: 63684
Effective search space used: 63684
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
