Query= MSMg01no433_f02.b1 MSMg01no433_f02.b1 CHROMAT_FILE:
MSMg01no433_f02.b1 PHD_FILE: MSMg01no433_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:22 2005
(515 letters)
>mm_chr10_22922306_22923219
Length = 914
Score = 911 bits (471), Expect = 0.0
Identities = 501/511 (98%), Gaps = 1/511 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaacaaatccaactcattatccaaagtgtttgcagaatcccccgaggagacag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaattctcaacaaatccaactcattatccaaagtgtttgcagaatcccccgaggagacag 655
Query: 65 actctgggaggagaactatcttcactactttacaagtgaaatgttgaagagaacattttt 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 654 actctgggaggagaactatcttcactactttacaagtgaaatgttgaggagaacattttt 595
Query: 125 cctcaaaaagtcagaggaggaatgacctatccaccacacaggctggtagcatgcacattg 184
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 594 cctcaaaaagtcagaggagtaatgacctatccaccacacaggccggtagcatgcacattg 535
Query: 185 tgttgttctagtaatatattcctaatttgtgtcataaatgcttattagcaggatccaaac 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgttgttctagtaatacattcctaatttgtgtcataaatgcttattagcaggatccaaac 475
Query: 245 taccagcagcaatgaaaactacagcataaagcgtaggaaaggcacttctgggagcgtttg 304
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 474 taccagcagcaatgaaaactacagcataaagc-taggaaaggtacttctgggagcgtttg 416
Query: 305 tgtcattcgcaagtaaaagctcatcttaatatcgttttcacggttagttcttcattttgg 364
|||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 415 tgtcatccgtaagtaaaagctcatcttgatatcgttttcacggttagttcttcattttgg 356
Query: 365 acaatgtatttattccctatctctacctcctttgcaaaacctccaaagaatgctagagaa 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcaatgtatttattccctatctctacctcctttgcaaaacctccaaagaatgctagagaa 296
Query: 425 aaccaggcaaccacaacatttgattttctggcaatcttccctttggaaaacagacttgaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaccaggcaaccacaacatttgattttctggcaatcttccctttggaaaacagacttgaa 236
Query: 485 cttcatgacagacagtagtctaggaatgtta 515
|||||||||||||||||||||||||||||||
Sbjct: 235 cttcatgacagacagtagtctaggaatgtta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 914
Length adjustment: 10
Effective length of query: 505
Effective length of database: 904
Effective search space: 456520
Effective search space used: 456520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_f02.g1 MSMg01no433_f02.g1 CHROMAT_FILE:
MSMg01no433_f02.g1 PHD_FILE: MSMg01no433_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:22 2005
(453 letters)
>mm_chr10_22779064_22779917
Length = 854
Score = 768 bits (397), Expect = 0.0
Identities = 439/453 (96%), Gaps = 2/453 (0%)
Strand = Plus / Plus
Query: 1 taggggagagttattagtactttaagatgacagaaatgcatttaaaaggtattttctgtg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tagggaagagttattagtactttaagatgacagaaatgcatttaaaaggtattttctgtg 259
Query: 61 ccctagcagcagggatgcatgagagtggcccctaacgtcacagtgagcaaagaaggacgt 120
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 260 ccctagcagcagggatgcatgagagtggtccctaccgtcacagtgagcaaagaaggacgt 319
Query: 121 ggcacattaagaagcacttctgtggcctacacaacaggcatatcttagctccgtttcctt 180
|||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 320 ggcacattaagaagcatttctgtggcctgcacaacaggcatagcttagctccgtttcctt 379
Query: 181 gccttgaataagattggtggacctagttatgaggcttttcta-gacaatgcaggtaaagg 239
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 380 gccttgaataagattggtggacctagttatgaggctttgctaagacaatgcaggtaaagg 439
Query: 240 gtttggtgtggtgcctgtcacaggctaagcatttaatagatgctagcgctagctgctact 299
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 440 gtttggtgtggtgcctgtcacaggctaagcatttaatagatgctagtgctaactgctact 499
Query: 300 aagagtgtgaaagaagatgccttt-gctgcactcctaacacttttataaaaattttagtc 358
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 500 aagagtgtgaaagaagatgccttttgctgcactcctaacacttttataaaaactttagtc 559
Query: 359 tgtgaattccaggattctagccacagtttcgtgtgtagggcagctgccttactgcaggat 418
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 tgtgaatttcaggattctagccacagtttcatgtgtagggcagctgccttactgcaggat 619
Query: 419 tcatttgtaaactgtgttccagaatgcctacac 451
|||||||||||||||||||||||||||||||||
Sbjct: 620 tcatttgtaaactgtgttccagaatgcctacac 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
