Query= MSMg01no434_o10.b1 MSMg01no434_o10.b1 CHROMAT_FILE:
MSMg01no434_o10.b1 PHD_FILE: MSMg01no434_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:27 2005
(392 letters)
>mm_chr10_20020513_20021303
Length = 791
Score = 706 bits (365), Expect = 0.0
Identities = 385/395 (97%), Gaps = 7/395 (1%)
Strand = Plus / Plus
Query: 1 tctctggtgtcactcctcctccatccttcttccttctctccatcttcctcccagaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tctctggtgtcactcctcctccatccttcttccttctctccatcttcttcccagaagaat 260
Query: 61 gcctgtggatgttaaaggacatctttactttgtggatgcaaggatactgggaaggcttag 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gcctgtggatgttaaaggacatctttactttgtggatgcaaggatgctgggaaggcttag 320
Query: 121 taagtgacccctgcaggactcctatcctatttaccaacaagagcctgacattccaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtgacccctgcaggactcctatcctatttaccaacaagagcctgacattccaattta 380
Query: 181 atttcatgtttttagcccaaggcatggtgacattgaaaaaaagtagttgtgaattacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcatgtttttagcccaaggcatggtgacattgaaaaaaagtagttgtgaattacttt 440
Query: 241 gtggtta---tttttgttatttttaataacgtcctgtaactaggtatgtcatggtattct 297
||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggttagcat----gttatttttaataacgtcctgtaactaggtatgtcatggtattct 496
Query: 298 ttctgtgggggtggagaccactatgaatttatttaactaacccatttctctcatctggaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttctgtgggggtggagaccactatgaatttatttaactaacccatttctctcatctggaa 556
Query: 358 tctctgggaacatgagttgacttgtttagtttggg 392
|||||||||||||||||||||||| ||||||||||
Sbjct: 557 tctctgggaacatgagttgacttggttagtttggg 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 791
Length adjustment: 9
Effective length of query: 383
Effective length of database: 782
Effective search space: 299506
Effective search space used: 299506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_o10.g1 MSMg01no434_o10.g1 CHROMAT_FILE:
MSMg01no434_o10.g1 PHD_FILE: MSMg01no434_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:27 2005
(279 letters)
>mm_chr10_20183173_20183851
Length = 679
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%)
Strand = Plus / Minus
Query: 1 atgtgtcaccacagtcttgtgacagtgattcttttacaacagttttgaactctctattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgtgtcaccacagtcttgtgacagtgattcttttacaacagttttgaactctctattga 418
Query: 61 gtgcctcgcaacacctcaaatcaccttttaagataatttgaaatgccttaatggagacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtgcctcgcaacacctcaaatcaccttttaagataatttgaaatgccttaatggagacta 358
Query: 121 ttaataaacgagtacctgtacttctttaagtaatgattaagtggctccagtaaccattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttaataaacgagtacctgtacttctttaagtaatgattaagtggctccagtaaccattta 298
Query: 181 ccaatagcgttgatggcatagataataggaaagaataaccaaaaggtgatttaaggacaa 240
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 297 ccaatagcgttgatggcatagataataggacagaataacccaaaggtgatttaaggacaa 238
Query: 241 tgtaagttatataagagaagtgaaaaatcttggaatg 277
||||||||||||||||||| |||||||||||||||||
Sbjct: 237 tgtaagttatataagagaaatgaaaaatcttggaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
