Query= MSMg01no435_a14.b1 MSMg01no435_a14.b1 CHROMAT_FILE:
MSMg01no435_a14.b1 PHD_FILE: MSMg01no435_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:37 2005
(404 letters)
>mm_chr10_120971397_120972197
Length = 801
Score = 714 bits (369), Expect = 0.0
Identities = 392/401 (97%), Gaps = 3/401 (0%)
Strand = Plus / Plus
Query: 1 cccgggctacatgttgccggccataacaacaaacccaaaccaaccaaccaacccccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccgggctacatgttgccggccataacaacaaacccaaaccaaccaaccaacccccacaa 260
Query: 61 caacaacacatcccggaggagaccagagaacacagaaggcagtccacacacattgctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 caacaacacatcccggaggagaccagagaacacagaaggcagtccacacacat---tgct 317
Query: 121 caactgacttcaaacgcaggaaggcaggtcagcagagaagggctggtcctttttgccatc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 caactgacttcaaacgcagaaaggcaggtcagcagagaagggctggtccttttcgccatc 377
Query: 181 agtagtcggcactgggacagcatttctttctgtcttttcaaaaaagtaattattatttta 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 378 ggtagtcggcactgggacagcatttctttctgtcttttttaaaaagtaattattatttta 437
Query: 241 taaatcgtacagtatttttatttagctttaagcttgaacatcaggactgatagtgcatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taaatcgtacagtatttttatttagctttaagcttgaacatcaggactgatagtgcatta 497
Query: 301 cgatcctttattctcggtgacaataaaaataaacatctgtgaatgactggcagagtatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgatcctttattctcggtgacaataaaaataaacatctgtgaatgactggcagagtatga 557
Query: 361 aggcagcgagtatgtccgcggcagttaggcttgagacattt 401
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 558 aggcagcgagtatgtccgcggcagttagacttgagacattt 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 801
Length adjustment: 9
Effective length of query: 395
Effective length of database: 792
Effective search space: 312840
Effective search space used: 312840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_a14.g1 MSMg01no435_a14.g1 CHROMAT_FILE:
MSMg01no435_a14.g1 PHD_FILE: MSMg01no435_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:37 2005
(388 letters)
>mm_chr10_121124463_121125254
Length = 792
Score = 716 bits (370), Expect = 0.0
Identities = 385/392 (98%), Gaps = 4/392 (1%)
Strand = Plus / Minus
Query: 1 aaaagacttatggaaattgttctcttcttccaccatatcaggtccagggaacaaacttgg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 704 aaaagacttatggaaattgttctcctcttccaccatatcaggtccagggaacaaacttgg 645
Query: 61 gattgtaggcttgtcaacaatcactttacccaccgagccttttcgccagccctacacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gattgtaggcttgtcaacaatcactttacccaccgagccttttcgccagccctacacact 585
Query: 121 acctttttgaagagatttctagtagaacgcatgttgattaattgaatgcatggatgaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acctttttgaagagatttctagtagaacgcatgttgattaattgaatgcatggatgaata 525
Query: 181 gagggaaaccaggcctggggaagtggcaagagactgagggtgaaggcttcacaaaaccta 240
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 524 gagggaaaccaggcttggggaaggggcaagagactgagggtgaaggcttcacaaaaccta 465
Query: 241 gtccattacatactgcaaacaccgagcagacctctcctgttctctgcagttgcagtctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gtccattacatactgcaaacaccgagcagacctctcctgttctctgcagttgcagtctgt 405
Query: 301 acagagagcgccatcgtctggatcatgagaaactagacatgt----aacttccagagacc 356
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 404 acagagagcgccatcgtctggatcatgagaaactagacatgtaacaaacttccagagacc 345
Query: 357 gatgctctctatagaacagaaaagccccgtcc 388
||||||||||||||||||||||||||||||||
Sbjct: 344 gatgctctctatagaacagaaaagccccgtcc 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 792
Length adjustment: 9
Effective length of query: 379
Effective length of database: 783
Effective search space: 296757
Effective search space used: 296757
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
