Query= MSMg01no435_d13.b1 MSMg01no435_d13.b1 CHROMAT_FILE:
MSMg01no435_d13.b1 PHD_FILE: MSMg01no435_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:52 2005
(439 letters)
>mm_chr10_31356648_31357483
Length = 836
Score = 629 bits (325), Expect = 0.0
Identities = 380/401 (94%), Gaps = 10/401 (2%)
Strand = Plus / Minus
Query: 43 gtttgaatcctatcccagagaggatttgttgtaaccatggtccatgagaaaagagtgtat 102
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gtttgaatcctatcccagataggatttgttgtaaccatggtccatgagaaaagagtgtat 777
Query: 103 aaagagaagactcatctcaccagagttgaacagattttgtaggccatggcaaagaggcca 162
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 776 aaagagaagactcatcttaccagagttgaacagattttgtaggccatggcagagaggcca 717
Query: 163 gaggaggatgcctactgtcctgatct---accaccctctgtgatgttctctcaagatcag 219
|||||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 716 gaggaggatgcctactgtcctgatctgtcacaa--ctctgtgatgttctctcaagatcag 659
Query: 220 gtctctcactgaacttaaagcttgtggtttccctagaagcttcgttcccagccaaccctg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtctctcactgaacttaaagcttgtggtttccctagaagcttcgttcccagccaaccctg 599
Query: 280 gtacttcttttactcccaagtcccaaatccctggtttggtgcagggtcctcatatttgca 339
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 598 gtacttcttttactcccaagtcccaaatccctggtttggtgcagggtcctcgtatttgcg 539
Query: 340 caacaattctttttgccaacactgaggcaactccatagccccagaattagttttttaaga 399
||||||||||||||||| |||||||| |||||||| ||||||| | || ||||||||||
Sbjct: 538 caacaattctttttgccgacactgagccaactccacagcccca-attt--ttttttaaga 482
Query: 400 ttataattttattctatttggnt-tacctgggttatcttgc 439
||||||||||||||||||||| | ||||||| |||||||||
Sbjct: 481 ttataattttattctatttgg-tctacctggattatcttgc 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 836
Length adjustment: 9
Effective length of query: 430
Effective length of database: 827
Effective search space: 355610
Effective search space used: 355610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_d13.g1 MSMg01no435_d13.g1 CHROMAT_FILE:
MSMg01no435_d13.g1 PHD_FILE: MSMg01no435_d13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:52 2005
(414 letters)
>mm_chr10_31156635_31157448
Length = 814
Score = 696 bits (360), Expect = 0.0
Identities = 400/422 (94%), Gaps = 14/422 (3%)
Strand = Plus / Plus
Query: 3 aaacagctgtaatggtgaccatctgcatacattgaggtctgtctttgaaaatacagtgaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaacagctgtaatggtgaccatctgcatacattgaggtctgtctttgaaaatacagtgaa 248
Query: 63 tagaggaagacagctgggctacacacacatacaaatatgcacacgttcatttatgcacac 122
||||||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||||
Sbjct: 249 tagaggaagactgctgggctacacacacacacaaatatgcatacattcatttacgcacac 308
Query: 123 gagagagagagagagagagagagagagagagaga--------------attaaaaaacac 168
|||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 309 gagagagagagagagagagagagagagagagagagagagagagagagaatttaaaaacac 368
Query: 169 tgacattcttagataaagaaatggaacatttaaactatttaaactgactattcctagatc 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgacattcttagataaagaaatggaacatttaaactatttaaactgactattcctagatc 428
Query: 229 tagtggtaaaaattctgtactatttctgtgaagcacgtactgggcgatttaacagaattt 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tagtggtaaaaattctgtactatttctgtgaagcacgtactgggcgatttaacagaattt 488
Query: 289 ttcatcgggcaataagctgataacctcagccatattatgaagaatattctcagaggtctc 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttcatcgggcaataagctgataacctcagccatattatgaagaatattctcagaggtctc 548
Query: 349 agggataccaaattacctttagattctatgacctaggccctactcagatacagaacgaat 408
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 549 agggataccaaattacctttagattctatgacctaggccctaaacagatacagaacgaat 608
Query: 409 ag 410
||
Sbjct: 609 ag 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
