Query= MSMg01no435_m17.b1 MSMg01no435_m17.b1 CHROMAT_FILE:
MSMg01no435_m17.b1 PHD_FILE: MSMg01no435_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:40 2005
(430 letters)
>mm_chr10_106860616_106861446
Length = 831
Score = 772 bits (399), Expect = 0.0
Identities = 420/427 (98%), Gaps = 3/427 (0%)
Strand = Plus / Plus
Query: 5 gaatt-atatatatatatgaaatctctctagttctttacaaaaatacatggataatttgg 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatatatatatgaaatctctctagttctttacaaaaatacatggataatttgg 264
Query: 64 catggaggcttcaaaagtagaactttatttgtaaagtttacagaacacaatgcattaggt 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catggaggcttcaaaagtagaactttatttgtaaagtttacagaacacaatgcattagg- 323
Query: 124 ttttttt-aagctgtgacatcatattagattaccttacaatacaaaggacccacaagtcg 182
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttttttaagctgtgacatcatattagattaccttacaatacaaaggacccacaagtca 383
Query: 183 ttgaaagcaccatttctaaacgtcggctttcaaatgcctcttctttcatctttgactcct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgaaagcaccatttctaaacgtcggctttcaaatgcctcttctttcatctttgactcct 443
Query: 243 agaatatacccgagataaaaattactcacacgacatctccctcccgaacatctacatgta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaatatacccgagataaaaattactcacacgacatctccctcccgaacatctacatgta 503
Query: 303 tttatttatttaacagatatgtctgttttcccggtacatgctagattctaaaaatgcaat 362
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 504 tttatttatttaacagatatgtctgttttcccggtacgtgctagattctagaaatgcaat 563
Query: 363 gggaaacaagttaactgcaatcccatcctaaggtttgctatgaggaactcttattctggc 422
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 gggaaacaagttaactgcaatcccatcctaaggtttgctatgagggactcttattctggc 623
Query: 423 taactag 429
|||||||
Sbjct: 624 taactag 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_m17.g1 MSMg01no435_m17.g1 CHROMAT_FILE:
MSMg01no435_m17.g1 PHD_FILE: MSMg01no435_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:40 2005
(445 letters)
>mm_chr10_107021673_107022517
Length = 845
Score = 845 bits (437), Expect = 0.0
Identities = 443/445 (99%)
Strand = Plus / Minus
Query: 1 cttgccttatccagctttaagcctaatccacaatttacagaaacacattctacaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cttgccttatccagctttaagcctaatccacaatttacagaaacacattctacaaataaa 586
Query: 61 aggataaagttcttaagtaatgtaaatgtgtaaaagcaagtggaaaaaatgtttaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aggataaagttcttaagtaatgtaaatgtgtaaaagcaagtggaaaaaatgtttaaccca 526
Query: 121 aactaagctttattttacttataaaactttctacttaacatggggtgttttgcaaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aactaagctttattttacttataaaactttctacttaacatggggtgttttgcaaaatgc 466
Query: 181 tgtaattgtctgcttgtcatatatatatataaactcacaattatatatccaaatttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgtaattgtctgcttgtcatatatatatataaactcacaattatatatccaaatttaaga 406
Query: 241 ggtgctctgagattctatctgccaagaagggtgaagttaacaaagcttgagagtctgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggtgctctgagattctatctgccaagaagggtgaagttaacaaagcttgagagtctgcac 346
Query: 301 catgaggccgcatctcaagttttcctcactgaaaattttgattgaaaagggaactttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 catgaggccgcatctcaagttttcctcactgaaaattttgattgaaaagggaactttccc 286
Query: 361 atatcattctgatcacaagaatgtacaaattcatttcacggtgtgatgtaaagaacagta 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 285 atatcattctgatcacaagaatgtacaaattcatttcatggtgtgatgtaaagaacagta 226
Query: 421 actctacgccctccaaatgatgttt 445
|||||| ||||||||||||||||||
Sbjct: 225 actctatgccctccaaatgatgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
