Query= MSMg01no435_p17.b1 MSMg01no435_p17.b1 CHROMAT_FILE:
MSMg01no435_p17.b1 PHD_FILE: MSMg01no435_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:55 2005
(508 letters)
>mm_chr10_70253181_70254088
Length = 908
Score = 864 bits (447), Expect = 0.0
Identities = 459/463 (99%)
Strand = Plus / Minus
Query: 46 actcaagttctgcggctatatttagcgattatttttgaaaacatttaaataagcttcatt 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 actcaagttctgcggctatatttagcgattatttttgaaaacatttaaataagcttcatt 849
Query: 106 catgtatttatttgtggagggagcacccttggaggtcaggggacagcttgtggagttggg 165
||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 848 catgtatttatttgtggagggagcatccttggagatcaggggacagcttgtagagttggg 789
Query: 166 tctctccttctacccctggaatcgaactcagttcctcaggcttggcttggcatccttacc 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tctctccttctacccctggaatcgaactcagttcctcaggcttggcttggcatccttacc 729
Query: 226 ctctaacccatcttgcctgcttgtatttatttattcttaagtctatttttaaattgtgtg 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ctctaacccatcttgcctgcttgtatttatttattcttaagtctatttttaaattgtgtg 669
Query: 286 gtgcttaaatcaaatccaagaccgcaagcatgcatggatgaagtgcatctcactgagaca 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gtgcttaaatcaaatccaagaccgcaagcatgcatggatgaagtgcatctcactgagaca 609
Query: 346 cacctgcagcaccagtggtttgcaatactctccattggcattgctatgcattagtggagt 405
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 608 cacctgcagcaccagtggtttgcaatactctccattggtattgctatgcattagtggagt 549
Query: 406 taccatgaaagctgttctaatatcagcccttcatctatgacattaagaggaagaaatgac 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 taccatgaaagctgttctaatatcagcccttcatctatgacattaagaggaagaaatgac 489
Query: 466 ttcagccaggcatatggactaaaaccatctatatctttgaaag 508
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttcagccaggcatatggactaaaaccatctatatctttgaaag 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_p17.g1 MSMg01no435_p17.g1 CHROMAT_FILE:
MSMg01no435_p17.g1 PHD_FILE: MSMg01no435_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:55 2005
(473 letters)
>mm_chr10_70092703_70093575
Length = 873
Score = 859 bits (444), Expect = 0.0
Identities = 468/480 (97%), Gaps = 7/480 (1%)
Strand = Plus / Plus
Query: 1 actttgactgtgagaagacttaagagaaagctatctagagaaagccacactggagagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 194 actttgactgtgagaagacttaagagaaagctatctagagaaagccacactagagagatt 253
Query: 61 agactgaaggtgtctaaacccatggaagcatttcaagcaacaagacacaacccaggtgtt 120
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 254 agactgacggtgtctaaacccacggaagcatttcaagcaacaagacacaacccaggtgtt 313
Query: 121 ttgttccttcccggataggcagtagtcaaaagtg-------ttgcctgcaatacgttcat 173
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 314 ttgttccttcccggataggcagtagtcaaaagtgtacagtattgcctgcaatacgttcat 373
Query: 174 gctaacaaaatgaactctgaacttaggaatgaatgaaataccaagaagagaaacattcct 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 374 gctaacaaaatgaactctgaacttaggaatgaatgaaataccaagaagagaaacatccct 433
Query: 234 aagatacagtgagccacgttcagaagggaaaattccaatgtgctaatttctttagcaagc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aagatacagtgagccacgttcagaagggaaaattccaatgtgctaatttctttagcaagc 493
Query: 294 gaatggcaggtaattaagaagggaaaattatttctgttgctgaaagaatctggtatgctt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaatggcaggtaattaagaagggaaaattatttctgttgctgaaagaatctggtatgctt 553
Query: 354 tcaactcaatacaagggtaattttgtttaaataatgattaagaaatccacaggaaattag 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcaactcaatacaagggtaattttgtttaaataatgattaagaaatccacaggaaattag 613
Query: 414 tatggtccataagcaattcttttctgaaatgcttcatatcctgtcacagggcatgtctga 473
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tgtggtccataagcaattcttttctgaaatgcttcatatcctgtcacagggcatgtctga 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
