Query= MSMg01no437_p13.b1 MSMg01no437_p13.b1 CHROMAT_FILE:
MSMg01no437_p13.b1 PHD_FILE: MSMg01no437_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:33 2005
(281 letters)
>mm_chr10_17419668_17420348
Length = 681
Score = 484 bits (250), Expect = e-141
Identities = 264/274 (96%), Gaps = 9/274 (3%)
Strand = Plus / Plus
Query: 8 gaattctttgttattgctattattattattattattattattattattattattattatt 67
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctttgttattg---------ttattattattattattattattattattattatt 267
Query: 68 attatgtgatttcagataaaggacaagttcaaagttcagggcaataggtctatgggtagt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attatgtgatttcagataaaggacaagttcaaagttcagggcaataggtctatgggtagt 327
Query: 128 ttaatttatgttggtattatgtcctaataaaaacaccaagagttaaaaatatactaggga 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttaatttatgttggtattatgtcctaataaaaacaccaagagttaaaaatatactaggga 387
Query: 188 gtgaataatataagattatgttacacatgcacacaaagccactgttttgggcaacaaata 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtgaataatataagattatgttacacatgcacacaaagccactgttttgggcaacaaata 447
Query: 248 ttcactgatgtttaaaaaaatgttcttagtacac 281
||||||||||||| ||||||||||||||||||||
Sbjct: 448 ttcactgatgttttaaaaaatgttcttagtacac 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_p13.g1 MSMg01no437_p13.g1 CHROMAT_FILE:
MSMg01no437_p13.g1 PHD_FILE: MSMg01no437_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:33 2005
(487 letters)
>mm_chr10_17559571_17560457
Length = 887
Score = 758 bits (392), Expect = 0.0
Identities = 415/424 (97%), Gaps = 4/424 (0%)
Strand = Plus / Minus
Query: 1 ttgggctcaccagcatctgtaaacaaatttcagatgaagaacacttgacttaatatccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttgggctcaccagcatctgtaaacaaatttcagatgaagaacacttgacttaatatccca 365
Query: 61 gtctcaattttgagataaaattcaaaaaataacaattcagaaccaagaaaacgaacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtctcaattttgagataaaattcaaaaaataacaattcagaaccaagaaaacgaacttaa 305
Query: 121 caaatattagtgtaaaagttacattgtctcactgaaatataatttgaaagatgcttctta 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 304 caaatattagtgtaaaagttacattgtctcactaaaatataatttgaaagatgcttctta 245
Query: 181 cacttataattaatgccagtgcctgttcagaaacacaatttgcatgtgtgtgtgtgtgtg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 244 cacttataattaatgccagtgcctgttcagaaacacaatatgcatgtgtgtgtgtgtgtg 185
Query: 241 tgtgtgtgtgtgtgtgtgtgc--gc--gtgcacgtgcatagatgtgcacgtggacatgtc 296
|||||||| ||| | |||||| || |||||||||||||||||||||||||||||||||
Sbjct: 184 tgtgtgtgcgtgcgcgtgtgcacgcacgtgcacgtgcatagatgtgcacgtggacatgtc 125
Query: 297 tatgctgtgctgtacttatggaagtcagaagacaacatttaggagtctttgtctaccttg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tatgctgtgctgtacttatggaagtcagaagacaacatttaggagtctttgtctaccttg 65
Query: 357 ttttgaggcagggtccctttcagcccatcagtgggcttcctatgctaggccactggccca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttttgaggcagggtccctttcagcccatcagtgggcttcctatgctaggccactggccca 5
Query: 417 ggag 420
||||
Sbjct: 4 ggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
