Query= MSMg01no438_j22.b1 MSMg01no438_j22.b1 CHROMAT_FILE:
MSMg01no438_j22.b1 PHD_FILE: MSMg01no438_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:27 2005
(545 letters)
>mm_chr10_69515757_69516701
Length = 945
Score = 681 bits (352), Expect = 0.0
Identities = 358/360 (99%)
Strand = Plus / Minus
Query: 5 gaattcttatatttcttactttgttgttgttttttattttctctcctttgtcccttattt 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaattcttatatttcctagtttgttgttgttttttattttctctcctttgtcccttattt 301
Query: 65 tgcatttgagcaaatgctctttgctttgtttaagttaagagagcccaagaaagactttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgcatttgagcaaatgctctttgctttgtttaagttaagagagcccaagaaagactttcc 241
Query: 125 ttggaggatttaagtgctactgaaaggctggggatgtagcaaacacaaagctctaagttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttggaggatttaagtgctactgaaaggctggggatgtagcaaacacaaagctctaagttc 181
Query: 185 catacctagcttctcctatcctaggatgtggtagtgaacacttacaattttagtaggagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 catacctagcttctcctatcctaggatgtggtagtgaacacttacaattttagtaggagg 121
Query: 245 ctcagaagctcaaagccatcttcagctacataagttcaaggccagcctaggatctgagac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctcagaagctcaaagccatcttcagctacataagttcaaggccagcctaggatctgagac 61
Query: 305 cctgtctataagagagcaagtgagatacacacatacacacacatacatacatacataggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cctgtctataagagagcaagtgagatacacacatacacacacatacatacatacataggt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_j22.g1 MSMg01no438_j22.g1 CHROMAT_FILE:
MSMg01no438_j22.g1 PHD_FILE: MSMg01no438_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:28 2005
(514 letters)
>mm_chr10_69351097_69352013
Length = 917
Score = 946 bits (489), Expect = 0.0
Identities = 509/517 (98%), Gaps = 3/517 (0%)
Strand = Plus / Plus
Query: 1 tttccagcactaagggagtaaacacaaagctcacttctgcctcttttaaagtaacaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccagcactaagggagtaaacacaaagctcacttctgcctcttttaaagtaacaggaa 260
Query: 61 ggtcacaggactgcagatcttccccagaagccccacgcacttctgatctttctcattggc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 ggtcacaggactgcagatcttccccagaagccccacccacttctgatctttctcattggc 320
Query: 121 tacttttgacgcaagagatgctgggaaatgtagttttcagttgggcacggttttctttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacttttgacgcaagagatgctgggaaatgtagttttcagttgggcacggttttctttca 380
Query: 181 ataaaaggaatacatacatcatctaccattttcacccccgcaagtgcaagttcagattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaaaggaatacatacatcatctaccattttcacccccgcaagtgcaagttcagattct 440
Query: 241 gaatgccagtagacagagtttcagagggtgccattaacaccccagctgctccctgtatgc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 441 gaatgccagtagacagagtttcatagggtgccattaacaccccagctgctccctctatgc 500
Query: 301 acgcccttcttc---acccccttttcaaaatcgctggtaccttatacacttcctagaaac 357
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacccttcttcttcacccccttttcaaaatcgctggtaccttatacacttcctagaaac 560
Query: 358 atgatgtgcgactttaggtgactgggatgctaaaaagtacatatgctaagggataatggg 417
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgatgcgcgactttaggtgactgggatgctaaaaagtacatatgctaagggataatggg 620
Query: 418 atgctaagatctattttttacctaatctgcctccagagacaggaagctatgctagaaaga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgctaagatctattttttacctaatctgcctccagagacaggaagctatgctagaaaga 680
Query: 478 agcctggcttggttgctggcagaattgagaggctaat 514
|||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcctggcttggttgctggcagaattgagaggctaat 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 917
Length adjustment: 10
Effective length of query: 504
Effective length of database: 907
Effective search space: 457128
Effective search space used: 457128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
