Query= MSMg01no439_c07.b1 MSMg01no439_c07.b1 CHROMAT_FILE:
MSMg01no439_c07.b1 PHD_FILE: MSMg01no439_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:10 2005
(502 letters)
>mm_chr10_24311159_24312061
Length = 903
Score = 913 bits (472), Expect = 0.0
Identities = 490/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 8 gaattcattataatagcagaaaaa-gcaggaaagcaatgaatgtaatttccatagcaaac 66
||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcattataaaagaagaaaaaagcaggaaagcaatgaatgtaatttccatagcaaac 267
Query: 67 atccatgcttccttccaacttctaactccctgtgagagggcacactccttaaaacttcat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atccatgcttccttccaacttctaactccctgtgagagggcacactccttaaaacttcat 327
Query: 127 cagaagcaaataggtccaggaaaccaagccacggtccctgagggttttagaaaaatattt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cagaagcaaataggtccaggaaaccaagccacggtccctgagggttttagaaaaatattt 387
Query: 187 attactatttttcaaaaagactctggcatacgccccctgccccgcttttctgggagggag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attactatttttcaaaaagactctggcatacgccccctgccccgcttttctgggagggag 447
Query: 247 aggggtggaattcatttacatgactgaacctaggacacaccagaaacactgagaagccag 306
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 448 aggggtggaattcatttacatgactgaacctaggacacaccagaaacactgggaagccag 507
Query: 307 ttccccaaggatcctaggacaaatctccccgtttccagatgcccttatagggctagagtc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttccccaaggatcctaggacaaatctccccgtttccagatgcccttatagggctagagtc 567
Query: 367 atacttcctataatgctgacagcccagtgtatgtgtcgcacatgggtttaggctttgagt 426
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 568 atacttcctataatgctgacagcccagtgtatgtgtcgcacatgggttttggctttgagt 627
Query: 427 caggttccaccagtatgtttccctgagacttttgatttcctctttgagggctggcactga 486
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cacgttccaccagtatgtttccctgagacttttgatttcctctttgagggctggcactga 687
Query: 487 cttcctgcttgctctt 502
||||||||||||||||
Sbjct: 688 cttcctgcttgctctt 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space: 439356
Effective search space used: 439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_c07.g1 MSMg01no439_c07.g1 CHROMAT_FILE:
MSMg01no439_c07.g1 PHD_FILE: MSMg01no439_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:10 2005
(243 letters)
>mm_chr10_24480842_24481484
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 caccttggagattaggattgaaacatctgaattttggaggactcaacattcacatcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccttggagattaggattgaaacatctgaattttggaggactcaacattcacatcatta 442
Query: 61 aaaatacaatggcacagattgaagaatataaagtttaaagaatacaagagggagtggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatacaatggcacagattgaagaatataaagtttaaagaatacaagagggagtggtga 382
Query: 121 tagcttgtcatctggagtccagaggaatgtaggattgcagatgataattgtgtacgtatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tagcttgtcatctggagtccagaggaatgtaggattgcagatgataattgtgtacgtagg 322
Query: 181 tgtacaggtgcgtgtgtggggccagggtatgtgtgtgtatgcacacacatgtgtatgttt 240
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tgtacaggtgtgtgtgtggggccagggtatgtgtgtgcatgcacacacatgtgtatgttt 262
Query: 241 tta 243
|||
Sbjct: 261 tta 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
