Query= MSMg01no439_m01.b1 MSMg01no439_m01.b1 CHROMAT_FILE:
MSMg01no439_m01.b1 PHD_FILE: MSMg01no439_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:58 2005
(407 letters)
>mm_chr10_76674909_76675717
Length = 809
Score = 710 bits (367), Expect = 0.0
Identities = 392/401 (97%), Gaps = 2/401 (0%)
Strand = Plus / Minus
Query: 9 gaattcaggttgtgcatcacaggtgcctctctaagagcttccctgcatatgggatttgac 68
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 609 gaattcaggttgtggatcacaggtgcctctctaagagcttccctgcatatgtgatttgac 550
Query: 69 agaaagcacagcactggaatctataatcaccaccaccaactgtccctcaccttagaatct 128
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 549 agaaagcacagcactggcatctataatcatcaccaccaactgtccctcaccttagaatct 490
Query: 129 ccccttggccccttactggggcccaagcagagctgagtcttactcctttagtagtgtgtg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccccttggccccttactggggcccaagcagagctgagtcttactcctttagtagtgtgtg 430
Query: 189 gta--gtgtgtgtgtgtgttgagactggttgccatggaaatcccaagccactgccccgct 246
| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 429 ggagtgtgtgtgtgtgtgttgagactggttgccatggaaaccccaagccactgccccgct 370
Query: 247 gagggatggatgcattcctagcatctctgttggtcagagtgggagacccctgaatgttcc 306
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gagggatggatgcattcctaacatctctgttggtcagagtgggagacccctgaatgttcc 310
Query: 307 tggccccagaacccagccaggctcttttggcttcttgagactaaggggacagtgaaaagg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggccccagaacccagccaggctcttttggcttcttgagactaaggggacagtgaaaagg 250
Query: 367 tattgactcctttagctttgaagatggaaccagggttaggt 407
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tattgactcctttagctttgaagatggaaccagggttaggt 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 809
Length adjustment: 9
Effective length of query: 398
Effective length of database: 800
Effective search space: 318400
Effective search space used: 318400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_m01.g1 MSMg01no439_m01.g1 CHROMAT_FILE:
MSMg01no439_m01.g1 PHD_FILE: MSMg01no439_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:58 2005
(558 letters)
>mm_chr10_76558345_76559302
Length = 958
Score = 1064 bits (550), Expect = 0.0
Identities = 556/558 (99%)
Strand = Plus / Plus
Query: 1 acacaagcccactgtgatgtttcaagtcatcaaacaacagaagttggggagcagatgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacaagcccactgtgatgtttcaagtcatcaaacaacagaagttggggagcagatgcca 260
Query: 61 ctccacccacaaactgggaagtctgggctgctgcccacaggcttcagcatcaactggggg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ctccacccacaaactgggaagtctgggctgttgcccacaggcttcagcatcaactggggg 320
Query: 121 aacctgttttctctagtccccactgccccctcctcccctggatcagcatgcagtagggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctgttttctctagtccccactgccccctcctcccctggatcagcatgcagtagggca 380
Query: 181 gcacaggttacctggaacttgtcagggtctgctgttccagcctgacccacaaagaggcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacaggttacctggaacttgtcagggtctgctgttccagcctgacccacaaagaggcca 440
Query: 241 gcgccacgctctagctccagtccctgtgaggcccgagcaaatggcaccctctggaattct 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gcgccacgctctagctccagtccctgcgaggcccgagcaaatggcaccctctggaattct 500
Query: 301 tcacagtctacgtagagagccacagagcctccgtcgacgctgagcgcgaagtgtgtccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcacagtctacgtagagagccacagagcctccgtcgacgctgagcgcgaagtgtgtccac 560
Query: 361 tgcccaacaaatgcaggtaggcggaagctggctcccgtctgggtctggctggccccaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcccaacaaatgcaggtaggcggaagctggctcccgtctgggtctggctggccccaggc 620
Query: 421 tccgtgtagagcaatgagatgttttgctgtccatctcggacctctgagagcttcacgccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccgtgtagagcaatgagatgttttgctgtccatctcggacctctgagagcttcacgccc 680
Query: 481 agtgagactaccacctgggcagcatctgtgatggcaaatagcacccctgctgcctctgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtgagactaccacctgggcagcatctgtgatggcaaatagcacccctgctgcctctgtg 740
Query: 541 gctggccggacatgaaac 558
||||||||||||||||||
Sbjct: 741 gctggccggacatgaaac 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
