Query= MSMg01no439_o20.b1 MSMg01no439_o20.b1 CHROMAT_FILE:
MSMg01no439_o20.b1 PHD_FILE: MSMg01no439_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:11 2005
(417 letters)
>mm_chr10_83230400_83231221
Length = 822
Score = 692 bits (358), Expect = 0.0
Identities = 399/414 (96%), Gaps = 5/414 (1%)
Strand = Plus / Plus
Query: 9 tctc-gcaaagtttctgataatcatagggctatcctcatctacaaagaactctcacatag 67
|||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tctcggcaatgtttgtgataatcatagggctatcctcatctacaaagaactctcacatag 268
Query: 68 agcgcctgaaaatgtgagcaaagacgctaagaagatggctcactgaagggctgtaaatgg 127
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agtgcctgaaaatgtgagcaaagacgctaagaagatggctcactgaagggctgtaaatgg 328
Query: 128 ccactgagccttccaggagggctcatcacattgaagttcaatgtctggaagtagcaacga 187
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 ccactgagccttccaggagggctcatcacattgaagtccaatgtctggaagtagcaacga 388
Query: 188 ggagacaacttgatgaggcaactttccctagccaacaacatgtccccaaccctgtcctgt 247
||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||
Sbjct: 389 ggagacaacttgatgaggcaactctccctagccaacaacttgtccccaaccccgtcctgt 448
Query: 248 ggctgccagcgtgatgacgtcatcactctagcaccattaagatgtctgctcctaattact 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggctgccagcgtgatgacgtcatcactctagcaccattaagatgtctgctcctaattact 508
Query: 308 gtgccttgcccacatcactgatgaatttgaggttcacaagcaagagctcctcttacttag 367
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 509 gtgccttgcccacatcactgatgaatttgagattcacaagcaagagctcctcttacttac 568
Query: 368 atacttttgaattcttgtgaccaaatatcaga-a---acacctgaagggaggta 417
|||||||||||||||||||||||| ||||||| | |||||||||||||||||
Sbjct: 569 atacttttgaattcttgtgaccaagtatcagacagagacacctgaagggaggta 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 822
Length adjustment: 9
Effective length of query: 408
Effective length of database: 813
Effective search space: 331704
Effective search space used: 331704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_o20.g1 MSMg01no439_o20.g1 CHROMAT_FILE:
MSMg01no439_o20.g1 PHD_FILE: MSMg01no439_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:11 2005
(501 letters)
>mm_chr10_83400329_83401229
Length = 901
Score = 969 bits (501), Expect = 0.0
Identities = 501/501 (100%)
Strand = Plus / Minus
Query: 1 agcccttagcaaggagaacctgattgagagagatgtgtgaaccttgacatgcatgctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agcccttagcaaggagaacctgattgagagagatgtgtgaaccttgacatgcatgctaat 494
Query: 61 gagacactggtcagatcttgaacttgcctccagtccacctccactctcctctgccctacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gagacactggtcagatcttgaacttgcctccagtccacctccactctcctctgccctacc 434
Query: 121 tcagcctcacacttcccatttgtaaatcctggtattagcaagtgggagatgctagaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcagcctcacacttcccatttgtaaatcctggtattagcaagtgggagatgctagaattt 374
Query: 181 caacccagctgagtttctgtttcccctcaacaactgtgatagtgcccagcataggagtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 caacccagctgagtttctgtttcccctcaacaactgtgatagtgcccagcataggagtgg 314
Query: 241 attggtctgctttgggcacctcatccaaccgcacacagactttgactgcagccccaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 attggtctgctttgggcacctcatccaaccgcacacagactttgactgcagccccaaaga 254
Query: 301 ctctgttatgatctctcctttaccatctcctgtttgttttataactgtgctcaccatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctctgttatgatctctcctttaccatctcctgtttgttttataactgtgctcaccatcag 194
Query: 361 ccccatgtggctatttcaattgaaattaaacaaaaacattttcagcttttcagttatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ccccatgtggctatttcaattgaaattaaacaaaaacattttcagcttttcagttatatg 134
Query: 421 tttgagttggaggccggaggttctcagtgtccaaattggttggcaggatcattactgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tttgagttggaggccggaggttctcagtgtccaaattggttggcaggatcattactgttc 74
Query: 481 ccattactgaagcacatgcta 501
|||||||||||||||||||||
Sbjct: 73 ccattactgaagcacatgcta 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
