Query= MSMg01no440_f19.b1 MSMg01no440_f19.b1 CHROMAT_FILE:
MSMg01no440_f19.b1 PHD_FILE: MSMg01no440_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:47 2005
(572 letters)
>mm_chr10_16446334_16447306
Length = 973
Score = 1019 bits (527), Expect = 0.0
Identities = 558/569 (98%), Gaps = 1/569 (0%)
Strand = Plus / Plus
Query: 5 gaattctaaag-aatttctacaactgtggatgcagcttagtggtgtaccatttgtctaat 63
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaagaaagttatacaactgtggatgcagcttagtggtgtaccatttgtctaat 264
Query: 64 actcagaagtccctagttttgaacagcaggcatgaaggaaattactgaccaaatgtgttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actcagaagtccctagttttgaacagcaggcatgaaggaaattactgaccaaatgtgttt 324
Query: 124 tcaacaacctcttagtacttagtatacattgttgttttaaagaagaaaggatattcaatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaacaacctcttagtacttagtatacattgttgttttaaagaagaaaggatattcaatc 384
Query: 184 taagcctaataacatggcaaaattagcagcatacacagtattattgaaagtaaaaatcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagcctaataacatggcaaaattagcagcatacacagtattattgaaagtaaaaatcca 444
Query: 244 tacttaatttcctctagtaataatcacactgcgtctgtagcttctttgccagaaagaatt 303
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 tacttcatttcctctagtaataatcacactgcgtctgcagcttctttgccagaaagaatt 504
Query: 304 aaatgaggaaacacaaatatcatcctatgaggagctggatagaaggctcagctattaaga 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatgaggaaacacaaatagcatcctatgaggagctggatagaaggctcagctattaaga 564
Query: 364 gtatgcaatgtccctatagagaagagccaagttctctacagaggacccatgtcaggaagc 423
|||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 565 gtatgcaatggccctatagagaggagccaagttcgctacagaggacccatgtcaggaagc 624
Query: 424 tcagtgtggcctgtaactaaaactccggggtcagccttccctctgtgcctctcgccttag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcagtgtggcctgtaactaaaactccggggtcagccttccctctgtgcctctcgccttag 684
Query: 484 tcaacacctacacacaagtgcatatgctcgcacacagaanaagacaaataaacatcgtta 543
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 685 tcaacacctacacacaagtgcatatgctcgcacacagaaaaagacaaataaacatcgtta 744
Query: 544 aacataaattcttccnaaatttaacatct 572
||||||||||||||| |||||||||||||
Sbjct: 745 aacataaattcttccaaaatttaacatct 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 973
Length adjustment: 10
Effective length of query: 562
Effective length of database: 963
Effective search space: 541206
Effective search space used: 541206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_f19.g1 MSMg01no440_f19.g1 CHROMAT_FILE:
MSMg01no440_f19.g1 PHD_FILE: MSMg01no440_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:47 2005
(580 letters)
>mm_chr10_16608869_16609848
Length = 980
Score = 1114 bits (576), Expect = 0.0
Identities = 579/580 (99%)
Strand = Plus / Minus
Query: 1 tttaaacagttcattaaagtctacattttgatgtagaccattaggatacctacagcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tttaaacagttcattaaagtctacattttgatgtagaccattaggatacctacagcatga 721
Query: 61 aataataaaatgtgtggtatggccactgaaactcatgtctgtaatctccttctacttgct 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 720 aataataaaatgtgtggtatggccactgaaactcgtgtctgtaatctccttctacttgct 661
Query: 121 ttgggtaaatcatttagccattaggggtattcattttctctgctgtacgataagggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttgggtaaatcatttagccattaggggtattcattttctctgctgtacgataagggtagt 601
Query: 181 ctgatgggtcctatctcatctatgtcatcaaattactatgaggtgtaaatgaagtgagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctgatgggtcctatctcatctatgtcatcaaattactatgaggtgtaaatgaagtgagta 541
Query: 241 tgctatgcattaagcactgtggatgaaggattattcataagaggtaatctataaattgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgctatgcattaagcactgtggatgaaggattattcataagaggtaatctataaattgga 481
Query: 301 cctattagctgtagagggatacttatttttggagttgatctcttttgatctttgtttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cctattagctgtagagggatacttatttttggagttgatctcttttgatctttgtttcca 421
Query: 361 tcaatatgtaccaaacctaatgaatgttcgatgcacacccttgcattaataacaatgtgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tcaatatgtaccaaacctaatgaatgttcgatgcacacccttgcattaataacaatgtgg 361
Query: 421 taattcttcaatttatatacattttgtaagataaaatgtaatattaaatttgcactggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 taattcttcaatttatatacattttgtaagataaaatgtaatattaaatttgcactggag 301
Query: 481 atgaggtcatattttctcaagatcatcttgctgtttttgttactgatgactatctgagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atgaggtcatattttctcaagatcatcttgctgtttttgttactgatgactatctgagcc 241
Query: 541 aattctttatcagctattcctttgagaactatgaggaaga 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aattctttatcagctattcctttgagaactatgaggaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
