Query= MSMg01no441_c21.b1 MSMg01no441_c21.b1 CHROMAT_FILE:
MSMg01no441_c21.b1 PHD_FILE: MSMg01no441_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:52 2005
(526 letters)
>mm_chr10_61274456_61275381
Length = 926
Score = 855 bits (442), Expect = 0.0
Identities = 457/462 (98%)
Strand = Plus / Minus
Query: 65 tacataaagcagggggcagagaacacttgtccctagacaccggacatccagcttcaaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 926 tacataaagcagggggcagagaacacttgtccctagacaccggacatccagcttctaaga 867
Query: 125 gcagtgaccactgagagaggtaatcctggaggtggactctggaatgcacccagcttaacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gcagtgaccactgagagaggtaatcctggaggtggactctggaatgcacccagcttaacc 807
Query: 185 tgtagagaatttcccaaccagactgagaggctggtcagagaaggggggccctgacagtct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 806 tgtagagaatttcccaaccagactgagaggctggtcagagaaggggggccctgacggtct 747
Query: 245 ccccgagttgaggagacaaactcgggatcaggcaacttgtgttcgtgacgggtgcacaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ccccgagttgaggagacaaactcgggatcaggcaacttgtgttcgtgacgggtgcacaga 687
Query: 305 gaaggcacctccgagacactcactcatcagtgcaggtatggatggaaattgccagaaaac 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaaggcacctctgagacactcactcatcagtgcaggtatggatggaaattgccagaaaac 627
Query: 365 tgggaatgaaccacccccagggggcaaggcgaacatttctaagagcccacacagaaccag 424
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 626 agggaatgaaccacccccagggggcaaggcgaacatttccaagagcccacacagaaccag 567
Query: 425 gaaagcctgtggcctcaggcgccacaggaagagagctaccagggggaggaggattctggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaaagcctgtggcctcaggcgccacaggaagagagctaccagggggaggaggattctggg 507
Query: 485 attcaagttatgaggccaaatcggctctagagccaaaactgc 526
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attcaagttatgaggccaaatcggctctagagccaaaactgc 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_c21.g1 MSMg01no441_c21.g1 CHROMAT_FILE:
MSMg01no441_c21.g1 PHD_FILE: MSMg01no441_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:52 2005
(349 letters)
>mm_chr10_61218798_61219547
Length = 750
Score = 480 bits (248), Expect = e-140
Identities = 322/362 (88%), Gaps = 29/362 (8%)
Strand = Plus / Plus
Query: 1 tcgccgggctgtggtggcacacaccttt-actccca--------gagg------caggcg 45
||||||||||||||||||||| |||||| || |||| |||| ||||||
Sbjct: 199 tcgccgggctgtggtggcacatacctttaac-cccagcacttgggaggcagagacaggcg 257
Query: 46 gatttctgagttcgaggccagcctggtctacaaagtgagttccaagccagccagggctac 105
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 258 gatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggctac 317
Query: 106 agagaaaccctgtcttgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaggcagaatt 165
||||||||||||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 318 agagaaaccctgtcttg------------aaaaaaaaaaaaaaaaaaaaagggcaggatt 365
Query: 166 ctcgaggcacttagccttggcttgtgggaagggggaaataacaaattaagactgtgttag 225
||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 366 ctcgaggtacttagccttggcttgtgggaagggggaaataacaaactaagactttgttag 425
Query: 226 aaacattgctacttgagaataaactgattctataggc-ctcatcccacttaattctctag 284
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 426 aaacattgctacttgagaataaactgaccctatagggtctcatcccacttaattctctag 485
Query: 285 gctgtgcatattttccttgcatagatttttgtttgtctgtttttcagacaaggtttctcc 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gctgtgcatattttccttgcatagatttttgtttgtctgtttttcagacaaggtttctcc 545
Query: 345 cg 346
||
Sbjct: 546 cg 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 750
Length adjustment: 9
Effective length of query: 340
Effective length of database: 741
Effective search space: 251940
Effective search space used: 251940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
