Query= MSMg01no442_b19.b1 MSMg01no442_b19.b1 CHROMAT_FILE:
MSMg01no442_b19.b1 PHD_FILE: MSMg01no442_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:08 2005
(464 letters)
>mm_chr10_92036994_92037858
Length = 865
Score = 886 bits (458), Expect = 0.0
Identities = 461/462 (99%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 4 ggaattc-ataaatatttgttgagtgaataaacacatgcaagttttccttgctatttggt 62
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggaattcaataaatatttgttgagtgaataaacacatgcaagttttccttgctatttggt 606
Query: 63 aagatccttgatgcatagactgacgttctaaagacactctatttggatcaatatggaact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aagatccttgatgcatagactgacgttctaaagacactctatttggatcaatatggaact 546
Query: 123 gattcttatatccactgtttagtctcctgcaagacagcccacctcagccctaccctatgc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gattcttatatccactgtttagtctcctgcaagacagcccacctcagccctaccctatgc 486
Query: 183 cagggttctcctctcaatggatggcaagtaggttctggaaccagatatttttcatgttaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cagggttctcctctcaatggatggcaagtaggttctggaaccagatatttttcatgttaa 426
Query: 243 tgatcattttggcttcaatagagtatgtccattagatggtaggtagtccccatttgttct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgatcattttggcttcaatagagtatgtccattagatggtaggtagtccccatttgttct 366
Query: 303 aagtccaacccagttcaagaaaaaacagctgtggcttccttcaggttcagctttgttctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aagtccaacccagttcaagaaaaaacagctgtggcttccttcaggttcagctttgttctg 306
Query: 363 ctgctctttcttagggaaagtgtctgagtagaacacatactattccctttctcctttgtt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctgctctttcttagggaaagtgtctgagtagaacacatactattccctttctcctttgtt 246
Query: 423 cctctttggcaaaaagaaagctgcttatgaatttgcctatgt 464
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cctctttggcaaaaagaaagctgcttatgaatttgcctatgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_b19.g1 MSMg01no442_b19.g1 CHROMAT_FILE:
MSMg01no442_b19.g1 PHD_FILE: MSMg01no442_b19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:08 2005
(396 letters)
>mm_chr10_91887462_91888257
Length = 796
Score = 750 bits (388), Expect = 0.0
Identities = 394/396 (99%)
Strand = Plus / Plus
Query: 1 tgaacctttggtcatgatgttgaagatgtacagccaaatcaagtgttcctgctatgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacctttggtcatgatgttgaagatgtacagccaaatcaagtgttcctgctatgtaaa 260
Query: 61 ctctttcttgcttcaagcagtgcttgacggtgttgtctttcaactcttaaatagacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctttcttgcttcaagcagtgcttgacggtgttgtctttcaactcttaaatagacttga 320
Query: 121 tggaaatgaggtcagagcacctaacattctgtgtgcctggctttcctctgatccctgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaaatgaggtcagagcacctaacattctgtgtgcctggctttcctctgatccctgctc 380
Query: 181 taggtccacattggtctttgtgatggttagtgttgactgccaacttaacgggatgctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggtccacattggtctttgtgatggttagtgttgactgccaacttaacgggatgctcaa 440
Query: 241 tcttctataatgaagcctctgggaacacacataaagaatcctctagattaacttaatctc 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttctagaaagaagcctctgggaacacacataaagaatcctctagattaacttaatctc 500
Query: 301 tggccatgcttatgagggatcacattgattaggtaaactgaggtcagaagaagaccaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggccatgcttatgagggatcacattgattaggtaaactgaggtcagaagaagaccaacc 560
Query: 361 ctaaaagtgggtggcatcattccttagacttgggcc 396
||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaaaagtgggtggcatcattccttagacttgggcc 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
