Query= MSMg01no442_j19.b1 MSMg01no442_j19.b1 CHROMAT_FILE:
MSMg01no442_j19.b1 PHD_FILE: MSMg01no442_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:51 2005
(373 letters)
>mm_chr10_32119170_32119942
Length = 773
Score = 652 bits (337), Expect = 0.0
Identities = 364/377 (96%), Gaps = 8/377 (2%)
Strand = Plus / Minus
Query: 1 gcctctgcctcccaaatgctgggattaaaggcatgcaccaccactgcctagcttctcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcctctgcctcccaaatgctgggattaaaggcatgcaccaccactgcctagcttctcttt 518
Query: 61 ctatattctaagattggaattttgtatgcttgttggatgctattttttcactcatgtagg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 517 ctatattctaagattggaattttgtatgcttgttgaatgctattttttcactcatgtagg 458
Query: 121 tatatactgtgtcttatagtctaaggacaatgcaaatatcagctttatgattgattatta 180
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 457 tatatactgtgtcttgtagtctaaggacaatgcaaataccagctttatgattgattttta 398
Query: 181 catctcaatttaagggttagcattacaggtatatgccatcattatacaatatctaataga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tatctcaatttaagggttagcattacaggtatatgccatcattatacaatatctaataga 338
Query: 241 gtcttaaaatgtccacc----ttttttataatagaaataaacttgagtcataatttgttt 296
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 337 gtcttaaaatgtccaccaaca----ttataatagaaataaacttgagtcataatttgttt 282
Query: 297 ttagctttctcatttctcattaattctgtttattttaaatatatgttaaataatttcatt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttagctttctcatttctcattaattctgtttattttaaatatatgttaaataatttcatt 222
Query: 357 gtatttattgatagata 373
|||||||||||||||||
Sbjct: 221 gtatttattgatagata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_j19.g1 MSMg01no442_j19.g1 CHROMAT_FILE:
MSMg01no442_j19.g1 PHD_FILE: MSMg01no442_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:51 2005
(428 letters)
>mm_chr10_31910889_31911715
Length = 827
Score = 752 bits (389), Expect = 0.0
Identities = 405/413 (98%), Gaps = 7/413 (1%)
Strand = Plus / Plus
Query: 1 aacggattgtagagagctcagcaccaataactatacctgtatcgcaggtcctgaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacggattgtagagagctcagcaccaataactatacctgtatcgcaggtcctgaatatgt 260
Query: 61 gactaagaaaaactgtggaagaggaaccagaaagaatgaaagaatataagcaccagagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactaagaaaaactgtggaagaggaaccagaaagaatgaaagaatataagcaccagagta 320
Query: 121 acaggaagtctgctgtgaaacagtctcttttagaaatggccacaatcaagttcagacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaggaagtctgctgtgaaacagtctcttttagaaatggccacaatcaagttcagacaat 380
Query: 181 agcaacatcaaagggcataataatgtgaaaaggaggtattgggagcattattgggtcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaacatcaaagggcataataatgtgaaaaggaggtattgggagcattattgggtcata 440
Query: 241 cccacaacatatttat---tacagtcaactaatgaggagaataataatcatctaccaagg 297
||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccacaaca-a---agacctacagtcaactaatgaggagaataataatcatctaccaagg 496
Query: 298 atcagaggctatataaatacagtataaatggagtcagcagcataggaagattgtaaatat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atcagaggctatataaatacagtataaatggagtcagcagcataggaagattgtaaatat 556
Query: 358 atatctctatctatctatctatctatctatctatctatctatctatctatcta 410
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atatctctatctatctatctatctatctatctatctatctatctatctatcta 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
