Query= MSMg01no442_o17.b1 MSMg01no442_o17.b1 CHROMAT_FILE:
MSMg01no442_o17.b1 PHD_FILE: MSMg01no442_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:20 2005
(353 letters)
>mm_chr10_126477383_126478130
Length = 748
Score = 629 bits (325), Expect = 0.0
Identities = 343/353 (97%), Gaps = 9/353 (2%)
Strand = Plus / Plus
Query: 1 taatgagttttaggccagcctggacaacaagagagcctgtctcaaccagactacaaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 taatgagttttaggccagcctggacaacaagagagcctgtctcaaccagactacaaaacc 264
Query: 61 acacccacaccccctacccacacacacacacacacacacccaaaaaaaagaaaggaaaga 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acacccacaccccctacc----cacacacacacacacacccaaaaaaaagaaaggaaaga 320
Query: 121 aaaagatatttaaaagatcctaacataacaaagctacaaatctttgatgaggttcactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagatatttaaaagatcctaacataacaaagctacaaatctttgatgaggttcactgt 380
Query: 181 cctaggtctctccttcagaaaatccatgcaagcattttagcgaaagagcatctccagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaggtctctccttcagaaaatccatgcaagcattttagcgaaagagcatctccagttt 440
Query: 241 tgttttgtttttttttctcggaaagcctatcttatttgtttcaggtaccctgaagccaac 300
| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 t-tttt----ttttttcacggaaagcctatcttatttgtttcaggtaccctgaagccaac 495
Query: 301 tagcttgagtgttctgaacactcgtcagcgctgtctgccttgcaggagaatag 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tagcttgagtgttctgaacactcgtcagcgctgtctgccttgcaggagaatag 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 748
Length adjustment: 9
Effective length of query: 344
Effective length of database: 739
Effective search space: 254216
Effective search space used: 254216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_o17.g1 MSMg01no442_o17.g1 CHROMAT_FILE:
MSMg01no442_o17.g1 PHD_FILE: MSMg01no442_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:20 2005
(344 letters)
>mm_chr10_126684206_126684949
Length = 744
Score = 613 bits (317), Expect = e-180
Identities = 338/345 (97%), Gaps = 2/345 (0%)
Strand = Plus / Minus
Query: 1 cacattaaggtgatcagcatgtgacttctgggggcctccgatgacgacggagaaggccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cacattaaggtgatcagcatgtgacttctgggggcctccgatgacgacggagaaggccca 323
Query: 61 gaataagccagctgaatctttactctggttaccccaacttcccgccaagaatgtcccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaataagccagctgaatctttactctggttaccccaacttcccgccaagaatgtcccagc 263
Query: 121 ctccactgtcctggtgcctgtcatattggtttgggattcctgtgttggagttaagatcac 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 262 ctccactgtcctggtgcctgtcatattggtttgagattcctgtgttggagttaagatcac 203
Query: 181 cctcttgggctggagagatggctcagaggttaagaacactgactgttcttccaggggacc 240
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 202 ccccttgggctggagagatggctcagaggttaagaacactgactgttcttccagcggacc 143
Query: 241 tgacttctgttctcaacacccacagggtggctt-acaaccagtgccagaggatctgatgg 299
||||| | |||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 142 tgactgcagttctcaacacccacagggtgg-ttcacaaccagtgccagaggatctgatgg 84
Query: 300 gctcttgtcacctctatgggcaccatgcatgcacatgatacacag 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gctcttgtcacctctatgggcaccatgcatgcacatgatacacag 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
