Query= MSMg01no442_p24.b1 MSMg01no442_p24.b1 CHROMAT_FILE:
MSMg01no442_p24.b1 PHD_FILE: MSMg01no442_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:27 2005
(396 letters)
>mm_chr10_50378545_50379339
Length = 795
Score = 743 bits (384), Expect = 0.0
Identities = 390/392 (99%), Gaps = 1/392 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggattgtctgcaaccttacccaactacctcgatgttgctacatttttgcatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggattgtctgcaaccttacccaactacctcgatgttgctacatttttgcatg 264
Query: 65 ttaacccctacattggacttttctactttgatggccgttttcgacctgtacctcttggac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaacccctacattggacttttctactttgatggccgttttcgacctgtacctcttggac 324
Query: 125 agacatttttagggattaaaagtacaaacaaggtaagagctcattttaatagttttactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agacatttttagggattaaaagtacaaacaaggtaagagctcattttaatagttttactt 384
Query: 185 ctaaaagaaatatttttattggcttattgttgaatacataattgggattaaatcctaccc 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaaaagaaatatttt-attggcttattgttgaatacataattgggattaaatcctaccc 443
Query: 245 agcatcacttccatgaaatataagtatggcttcaaatgaagtcaggcactcctctcagta 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agcatcacttccataaaatataagtatggcttcaaatgaagtcaggcactcctctcagta 503
Query: 305 ttggcagtaaagtcttcctacagaatggttcttagtgtaggttacagtatttcaacatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttggcagtaaagtcttcctacagaatggttcttagtgtaggttacagtatttcaacatgt 563
Query: 365 attttgaaattttagctgttaaaaacttcacc 396
||||||||||||||||||||||||||||||||
Sbjct: 564 attttgaaattttagctgttaaaaacttcacc 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 795
Length adjustment: 9
Effective length of query: 387
Effective length of database: 786
Effective search space: 304182
Effective search space used: 304182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_p24.g1 MSMg01no442_p24.g1 CHROMAT_FILE:
MSMg01no442_p24.g1 PHD_FILE: MSMg01no442_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:27 2005
(387 letters)
>mm_chr10_50570869_50571655
Length = 787
Score = 679 bits (351), Expect = 0.0
Identities = 378/387 (97%)
Strand = Plus / Minus
Query: 1 acaggttgcatgcacaagattgtgtgcatccatatttagttatggatggagaaggggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 acaggttgcatgcacaagattgtgtgcatccatatttagttatggatggagaaggggctc 643
Query: 61 agaaagccctagtcctccttagggaaggctgctgatgctgggcaagagaaagtcactgtt 120
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 642 agaaagccctagtcctccttaaggaaggctgctgatgctgggcaagagagagtcactgtt 583
Query: 121 gagttttcaagctctagtggctaaccttaaacccttgctcatctagacagccctggccac 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gagttttcaagctctcgtggctaaccttaaacccttgctcatctagacagccctggccac 523
Query: 181 attcagtgtgttcactagacaacatggtaagaaagtaggatgaggaccagcagggaagga 240
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 522 attcagtgcgttcactagacaacatggtaagaaagaaggatgaggaccagcagggaagga 463
Query: 241 gggtgatgcccatggccggcgtctaagacaggatgggactgaatgtgaacaggatgcact 300
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 462 gggtgatgcccatggccggcgtctaagacaggacaggactgaatgtgaacaggatgcact 403
Query: 301 ttatacaggtagcaaatcaccaacgagtaaacttaacaaaaagaaatctgtaacgtgtaa 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttatacaggtagcaaatcaccaaagagtaaacttaacaaaaagaaatctgtaacgtgtaa 343
Query: 361 gacagatcattcaatctttttatcatt 387
|||||||||||||||||||| ||||||
Sbjct: 342 gacagatcattcaatcttttcatcatt 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
