Query= MSMg01no443_p15.b1 MSMg01no443_p15.b1 CHROMAT_FILE:
MSMg01no443_p15.b1 PHD_FILE: MSMg01no443_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:44 2005
(465 letters)
>mm_chr10_126032181_126033044
Length = 864
Score = 804 bits (416), Expect = 0.0
Identities = 454/472 (96%), Gaps = 14/472 (2%)
Strand = Plus / Plus
Query: 1 ttcatatttctagaaattagggttcaactacagtttaatattacatgagcaatcagacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatatttctagaaattagggttcaactacagtttaatattacatgagcaatcagacac 260
Query: 61 agggatagagttgaaaaccagtgtcttgcaaaaccaaagtctgcaaggaatgtaaatctg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 agggatagagttgaaaaccagtgtcttgcaaaa-caaagtctgcaaggaatgtaaatctg 319
Query: 121 gttaaaatgccacagcagtccataacacgggataatactgggttaagtttgtattacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gttaaaatgccacagcagtccataacacgggataatactgggttaagtttgtattacagc 379
Query: 181 ctaggcccataacttttggacttgaggagaaaccaggaccagaataccaagcaagcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctaggcccataacttttggacttgaggagaaaccaggaccagaataccaagcaagcagag 439
Query: 241 agagtctatgtttttgc----atccaatttgaacgcctgttactgcactagacacactaa 296
||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agagtctatgt----gccagcatccaatttgaacgcctgttactgcactagacacactaa 495
Query: 297 cattcatgcacacaacttaaatccccttttcatctctagaaaagcaatcacagtagaaga 356
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 496 cattcatgtacacaacttaaatacccttttcatctctagaaaagcaatcacagtagaaga 555
Query: 357 aggagaaggagaaaaggagaaagagaaaaggagaagaaagaaagaaagaaagaaagaaag 416
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 556 aggagaaggagaaaaggagaaagagaaaaggagaagaa-gaaagaaagaaagaaagaaag 614
Query: 417 aaagaaagaaagaaagaaagaaagagagagaga---gagagagagagagaga 465
||||||||||||||||||||||||| ||| ||| || |||||||||||||
Sbjct: 615 aaagaaagaaagaaagaaagaaaga-agaaagaaaagaaagagagagagaga 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 864
Length adjustment: 10
Effective length of query: 455
Effective length of database: 854
Effective search space: 388570
Effective search space used: 388570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_p15.g1 MSMg01no443_p15.g1 CHROMAT_FILE:
MSMg01no443_p15.g1 PHD_FILE: MSMg01no443_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:44 2005
(405 letters)
>mm_chr10_126171414_126172218
Length = 805
Score = 729 bits (377), Expect = 0.0
Identities = 398/405 (98%)
Strand = Plus / Minus
Query: 1 agcagccttgctgccactgatctgacggtcacagactccttctgttctatggccacctgc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 605 agcagccttgctgccactgatctgacggtcacagactccctctgttctatggccacctgc 546
Query: 61 ctcccttttgtacaacaggcaaatctggctcacacagaggcactgatgtgaactctgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctcccttttgtacaacaggcaaatctggctcacacagaggcactgatgtgaactctgatc 486
Query: 121 tcagatagtgtgggggcggttttcccactggtgagagaatatttttctggtccagataaa 180
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 485 tcagatagtgtgggggcggttttcctactggtgagagaatatttttctggtccagagaaa 426
Query: 181 ctgtcagatgttaaagtactcctgtggggaagggtagcatggtaggatactaggctgcat 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 425 ctgtcagatgttaaagtactcctgtgggggagggtagcatggtaggatactaggctgcat 366
Query: 241 gggctcttgtctagttcattggtagaaggaaatagatggctgaattgtgtgcttggctcc 300
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gggcactggtctagttcattggtagaaggaaatagatggctgaattgtgtgcttggctcc 306
Query: 301 aggagaattcagttaactgaattccccatgagaggagcttgttagaataggtgagttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aggagaattcagttaactgaattccccatgagaggagcttgttagaataggtgagttgat 246
Query: 361 aggttttctctcactgtttgtccctgaggtttggtcttttgctgt 405
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 245 aggttttctctcactgtttgtccccgaggtttggtcttttgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
