Query= MSMg01no445_g11.b1 MSMg01no445_g11.b1 CHROMAT_FILE:
MSMg01no445_g11.b1 PHD_FILE: MSMg01no445_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:35 2005
(289 letters)
>mm_chr10_55885318_55886007
Length = 690
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 acctagaagtctgatgaactaagtatctctgtgagtgggaacaaccaaacaacactgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctagaagtctgatgaactaagtatctctgtgagtgggaacaaccaaacaacactgaaa 260
Query: 61 gcatgcgtgcctagaaggaagtttatggaaaactatagcctccaggtcccatttaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gcatgcgtgcctagaaggaagtttatggaaaactatagcctccaggttccatttaaaatt 320
Query: 121 gcaagctgccagccctgggacttcttggaaggcacagaaatcaggaaacaagagggaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagctgccagccctgggacttcttggaaggcacagaaatcaggaaacaagagggaaga 380
Query: 181 gcaaatcaaaatgcacacactgaggcctgagatccagcaccgcgtcaacactaactccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaaatcaaaatgcacacactgaggcctgagatccagcaccgcgtcaacactaactccac 440
Query: 241 tgagatgtgtgggtgttcaggca-aggactgcaggaggcttctg 283
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 tgagatgtgtgggtgttcaggcacaggactgcaggaggcttctg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_g11.g1 MSMg01no445_g11.g1 CHROMAT_FILE:
MSMg01no445_g11.g1 PHD_FILE: MSMg01no445_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:35 2005
(429 letters)
>mm_chr10_56061442_56062270
Length = 829
Score = 808 bits (418), Expect = 0.0
Identities = 424/426 (99%)
Strand = Plus / Minus
Query: 1 cattattcataaaatgagtatttttggagttttatcctattattttcctcataatttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cattattcataaaatgagtatttttggagttttatcctattattttcctcataatttcca 416
Query: 61 tatttttacatatgtttactatagatagctgagagattctctgcattcagattggaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tatttttacatatgtttactatagatagctgagagattctctgcattcagattggaattc 356
Query: 121 tagtaactgcttaaatcctatcatccaagcatcagttttacagtggttgaagaaatattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tagtaactgcttaaatcctatcatccaagcatcagttttacagtggttgaagaaatattc 296
Query: 181 tttcaatatgtatctcattaaattcatttttatttgttctgaaggatattattcttctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tttcaatatgtatctcattaaattcatttttatttgttctgaaggatattattcttctac 236
Query: 241 aggatccataaataatacctgcgattgacagaaagattcatttattcattcattcatcca 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aggagccataaataatacctgcgattgacagaaagattcatttattcattcattcatcca 176
Query: 301 accacttaggatttgttgcaggaattaaaaaacaactcccaaaggaacttctgaaaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 accacttaggatttgttgcaggaattaaaaaacaactcccaaaggaacttctgaaaatta 116
Query: 361 ggaaagtaagaaagcttgggaatgaccatgggtcagtggaaaggggactttagtgattgg 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 115 ggaaagtaagaaagcttgggaatgaccatgggtcagtggaaaggggattttagtgattgg 56
Query: 421 gatatg 426
||||||
Sbjct: 55 gatatg 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
