Query= MSMg01no445_o16.b1 MSMg01no445_o16.b1 CHROMAT_FILE:
MSMg01no445_o16.b1 PHD_FILE: MSMg01no445_o16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:17 2005
(107 letters)
>mm_chr10_80692116_80692623
Length = 508
Score = 172 bits (89), Expect = 5e-48
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 5 ggaattctgttgt-aacatggaaataagaagaaaaacatgatgtagcagacatgaccctg 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggaattctgttgtaaatatggaaataagaagaaaaacatgatgtagcagacatgaccctg 246
Query: 64 ttggtgccagggtttggtttgggggcgtccctagttgtgtg 104
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 245 ttggtggcagggtttggtttgggggcgtccctagttgtgtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 107
Length of database: 508
Length adjustment: 8
Effective length of query: 99
Effective length of database: 500
Effective search space: 49500
Effective search space used: 49500
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no445_o16.g1 MSMg01no445_o16.g1 CHROMAT_FILE:
MSMg01no445_o16.g1 PHD_FILE: MSMg01no445_o16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:17 2005
(282 letters)
>mm_chr10_80524336_80525016
Length = 681
Score = 514 bits (266), Expect = e-150
Identities = 278/284 (97%), Gaps = 5/284 (1%)
Strand = Plus / Plus
Query: 1 caggtgggccatggtggcacaggcctgtaatcccagcgctcagtaggcagaggcaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtgggccatggtggcacaggcctgtaatcccagcgctcagtaggcagaggcaggagg 260
Query: 61 atctctgtgagttccaggacagccagggccacacagagaaaccctgtcttggaagcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctctgtgagttccaggacagccagggccacacagagaaaccctgtcttggaagcagaa 320
Query: 121 aagaaaagcaagaactctgtccatccccctgcatcagtgtccaagtgctgatatgatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaaagcaagaactctgtccatccccctgcatcagtgtccaagtgctgatatgatatg 380
Query: 181 ctgtgatcctgccaatcccctgcacacaccccacctttgacatggcgtagttataattac 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgatcctgccaatcctctgcacacaccccacctttgacatggcgtagttataattac 440
Query: 241 cattt--cttagtgtcctgggttggttagggatgtgaggtgtgc 282
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ca---aacttagtgtcctgggttggttagggatgtgaggtgtgc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
