Query= MSMg01no446_h19.b1 MSMg01no446_h19.b1 CHROMAT_FILE:
MSMg01no446_h19.b1 PHD_FILE: MSMg01no446_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:01 2005
(313 letters)
>mm_chr10_97409955_97410667
Length = 713
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 1 agttatggtggtaaaggcttaaactgtttgggaagcctctggggatctcctcaagtaaca 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 699 agttatggtggtaaaggcttaaactgtttgggaagcctctgggaatctcctcaagtaaca 640
Query: 61 attcacataatgaggtatcctgcttctggcttgtatatttttgtttgaaaatcccataac 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 639 attcacataatgaggcatcctgcttctggcttgtatatttttgtttgaaaatcccatagc 580
Query: 121 ttctagcaaaaactccatatattctagcagaatatctccttcctccttctaatttattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttctagcaaaaactccatatattctagcagaatatctccttcctccttctaatttattta 520
Query: 181 tgtgtaaacttacacaattttactttttctgctccttacaccactaatcttaattgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgtgtaaacttacacaattttactttttctgctccttacaccactaatcttaattgattt 460
Query: 241 ctcaaaatacaaacagaaattcaatatcacaaccaagaaaacaaagttaaactccatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctcaaaatacaaacagaaattcaatatcacaaccaagaaaacaaagttaaactccatcca 400
Query: 301 aaaagagataaac 313
|||||||||||||
Sbjct: 399 aaaagagataaac 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_h19.g1 MSMg01no446_h19.g1 CHROMAT_FILE:
MSMg01no446_h19.g1 PHD_FILE: MSMg01no446_h19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:01 2005
(626 letters)
>mm_chr10_97214142_97215165
Length = 1024
Score = 1176 bits (608), Expect = 0.0
Identities = 621/626 (99%), Gaps = 2/626 (0%)
Strand = Plus / Plus
Query: 1 ataattgggaataacaaacaagacatacatacaaaacaataaagagaaagccacacgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ataattgggaataacaaacaagacatacatacaaaacaataaagagaaagccacacgggt 260
Query: 61 atgtgtgtatattttcaagcactgatttatataatggtattttgaaatcagaaatttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtgtgtatattttcaagcactgatttatataatggtattttgaaatcagaaatttaaa 320
Query: 121 aaatatatacaaagggaaacagtactgtcacatagtagattgactgtgtgggaaattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatatatacaaagggaaacagtactgtcacatagtagattgactgtgtgggaaattaaa 380
Query: 181 aattgtctactagactccagctctataaacaaagttacttcgtgttcatattgtgttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattgtctactagactccagctctataaacaaagttacttcgtgttcatattgtgttgga 440
Query: 241 cattagaactgatattctagacctgaaagcccattcttaacatgttagaccccctgtatt 300
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattagaactgata--ccagacctgaaagcccattcttaacatgttagaccccctgtatt 498
Query: 301 gagcaaagcgtggctttggtaatgaagagcaggtatctttagctgataagaggaataagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gagcaaagcgtggctttggtaatgaagagcaggtatctttagctgataagaggaataagt 558
Query: 361 gtttcagacaagcagtgggtagactttgacaggagcagctagtttcaggctcttactatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtttcagacaagcagtgggtagactttgacaggagcagctagtttcaggctcttactatg 618
Query: 421 atctgtagcatcaatacatctactgtgcatgtcatcttcctgattcatgctgaaatcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atctgtagcatcaatacatctactgtgcatgtcatcttcctgattcatgctgaaatcaga 678
Query: 481 ggaagaaacatgaaagagcaaaacaataggtaaacactggctgagtgaaaagtacatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ggaagaaacatgaaagagcaaaacaataggtaaacactggctgagtgaaaagtacatgca 738
Query: 541 aaggagtctatttcctacttaactttacaggccaaaaaagtgataggagagccgggtggt 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 739 aaggagtctatttcctacttaactttacaggcctaaaaagtgataggagagccgggtggt 798
Query: 601 ggtggcgcatgcctttaatcccagca 626
||||||||||||||||||||||||||
Sbjct: 799 ggtggcgcatgcctttaatcccagca 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1024
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1014
Effective search space: 624624
Effective search space used: 624624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
