Query= MSMg01no447_e20.b1 MSMg01no447_e20.b1 CHROMAT_FILE:
MSMg01no447_e20.b1 PHD_FILE: MSMg01no447_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:09 2005
(561 letters)
>mm_chr10_28649210_28650171
Length = 962
Score = 965 bits (499), Expect = 0.0
Identities = 542/557 (97%), Gaps = 3/557 (0%)
Strand = Plus / Minus
Query: 7 gaattctaaatctttacacaaaacaggtgcatttctacaaaattggactaggaagaatgc 66
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaattctaaatcattagacaaaacaggtgcatttctacaaaattggactaggaagaatgc 703
Query: 67 cagaaagctattaattggcaataacactggaaataaagaactgttgaagagcccaaagta 126
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 702 cagaaagctattaattggcaataatactggaaataaagaactgttgaagagctcaaagta 643
Query: 127 attccaagccttggtctgctgcctgaatgttacatctttttgccctacaatctcttaagt 186
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 642 attccaagccttgatctgctgcctgaatgttacatctttttgccctacactctcttaagt 583
Query: 187 tacagtaaaaatcactggtctatgtaggtccataaagttgagataagactgctgccttgt 246
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 582 tacagtaaaaatcactggactatgtagctccataaagttgagataagactgctgccttgt 523
Query: 247 tt--aaaaaaagtcttgaggctgtacaaacatcatggtatcatacgacgttatttagagg 304
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttaaaaaaaaagtcttgaggctgtacaaacatcatggtatcatacgacgttatttagagg 463
Query: 305 acatgaagcaaggtgccagggacatggctcagtctccaaggggaactcacttgtttaatt 364
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 462 acatgaagcaaggtgccagggacatggctcagtctccaaggggaactcgcttgtttaatt 403
Query: 365 cataatgccaatatacaactggataacaaactcactctacccacctctctttttgtttcc 424
|||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 402 cataatgccaatatacaactcgataacaaactcacactacctacctctc-ttttgtttcc 344
Query: 425 attctacaaatatgtgatacaatttccctttgagaactcagttcagatctggaactggta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 attctacaaatatgtgatacaatttccctttgagaactcagttcagatctggaactggta 284
Query: 485 acctccctgaatgctcagaaaataaagcttcatttttacacttccatatctaaagtcagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acctccctgaatgctcagaaaataaagcttcatttttacacttccatatctaaagtcagt 224
Query: 545 ttcttagctttgatgtc 561
|||||||||||||||||
Sbjct: 223 ttcttagctttgatgtc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 962
Length adjustment: 10
Effective length of query: 551
Effective length of database: 952
Effective search space: 524552
Effective search space used: 524552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_e20.g1 MSMg01no447_e20.g1 CHROMAT_FILE:
MSMg01no447_e20.g1 PHD_FILE: MSMg01no447_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:09 2005
(331 letters)
>mm_chr10_28458674_28459404
Length = 731
Score = 617 bits (319), Expect = 0.0
Identities = 328/331 (99%)
Strand = Plus / Plus
Query: 1 caggatggccagagctacacagggaaaccctgtctcaaaaaactaacaaacaaactcacc 60
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 201 caggatggccagagctacacagagaaaccctgtctcaaaaaacaaacaaacaaactcacc 260
Query: 61 tccaaattcagcaacttcagacgaaaaacatcttacatgctttcttgagcatatgaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaaattcagcaacttcagacgaaaaacatcttacatgctttcttgagcatatgaaaaa 320
Query: 121 gttttaaaaattattagccaactatttattaaaactagctcaataaagtgcttctaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttaaaaattattagccaactatttattaaaactagctcaataaagtgcttctaaata 380
Query: 181 aaattggttttgataaaatgataaaaatgatcaaataaatacgtgatttttgcctgggtt 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 aaattggttttgataaaatgataaaaatgatcaaataaatatgtgatttttgcctgggtt 440
Query: 241 ttgaaatgcctaattcattaacatttgtttaagtgaatttatttggagactggtatattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaatgcctaattcattaacatttgtttaagtgaatttatttggagactggtatattt 500
Query: 301 aattcatggaataactgtaatcttacattca 331
|||||||||||||||||||||||||||||||
Sbjct: 501 aattcatggaataactgtaatcttacattca 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
