Query= MSMg01no449_d22.b1 MSMg01no449_d22.b1 CHROMAT_FILE:
MSMg01no449_d22.b1 PHD_FILE: MSMg01no449_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:48 2005
(587 letters)
>mm_chr10_39355108_39356091
Length = 984
Score = 1073 bits (555), Expect = 0.0
Identities = 578/587 (98%), Gaps = 3/587 (0%)
Strand = Plus / Plus
Query: 1 ctcgaactcagatctgcctgcatctacctctaaccttgagtgctgggatttgatgtgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcgaactcagatctgcctgcatctacctctaaccttgagtgctgggatttgatgtgagt 260
Query: 61 cacggtacccagtcctaaaataaacctttctttttgggaaaaaaaaaaaaaaaagattta 120
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 caccgtacccagtcctaaaataaacctttctttttggg---aaaaaaaaaaaaagattta 317
Query: 121 taaaagagttgaaaggtactgcatagcagatgtttctatagcaccaatttaagcctgttc 180
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 318 taagagagttgaaaggtactgcatagcagatgtttctatagcactaatttaagcctgttc 377
Query: 181 tggtatccgagttatattttagtataccaaaaaatgtttagctaaggagctaattctcct 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 378 tggtatccgagttatattttagtataccaaaaaatgtttaactaaggagctaattctcct 437
Query: 241 accactaatctgaaggggaactttaataccagaagtttccttccactaatctagtgatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 accactaatctgaaggggaactttaataccagaagtttccttccactaatctaatgatgc 497
Query: 301 tatttatatgtgaaaggttttgaacatcattgctttagttatgattactacggctgcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tatttatatgtgaaaggttttgaacatcattgctttagttatgattactacggctgcgat 557
Query: 361 aaaacaccacaaccgaagcaagttggggaggaaggggtttgtctgacttccatctctgta 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaaacaccacaaccgaagcaagctggggaggaaggggtttgtctgacttccatctctgta 617
Query: 421 tcattcaaaggaatcgggacaggaactcacacggtgtgggaacctggaggcaggagctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tcattcaaaggaatcgggacaggaactcacacggtgtgggaacctggaggcaggagctga 677
Query: 481 tgctgaggccatggacggtgctgcttaccagcttgctcgttgtgacttgctcagcctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgctgaggccatggacggtgctgcttaccagcttgctcgttgtgacttgctcagcctgct 737
Query: 541 tgcttatagaacccagcatcaccagcctagggatggtaccacccaca 587
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tgcttatagaacccagcatcaccagcctagggatggtaccacccaca 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 984
Length adjustment: 10
Effective length of query: 577
Effective length of database: 974
Effective search space: 561998
Effective search space used: 561998
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_d22.g1 MSMg01no449_d22.g1 CHROMAT_FILE:
MSMg01no449_d22.g1 PHD_FILE: MSMg01no449_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:49 2005
(276 letters)
>mm_chr10_39505556_39506231
Length = 676
Score = 513 bits (265), Expect = e-150
Identities = 271/273 (99%)
Strand = Plus / Minus
Query: 1 ttcatatacataaatgcagctcttaggagatagtcatctttactcaaataaacaggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttcatatacataaatgcagctcttaggagatagtcatctttactcaaataaacaggaaga 299
Query: 61 caaccaacacttatgtggaccatattatctttgctttgtcttggttttgttaacaatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caaccaacacttatgtggaccatattatctttgctttgtcttggttttgttaacaatctc 239
Query: 121 tagtgcctttttttttcagtctcttaatttcagataccaaataaatatttaagtattaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 238 tagtgcctttttttttcagtctcttaatttcagataccaaataaatatttaactattaaa 179
Query: 181 ttaaaattatttggaaatctgtaattctggtttcatatatattgccctaaaatatagctt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 178 ttaaaattatttggaaatctgtaattctggtttcatatatatagccctaaaatatagctt 119
Query: 241 agaaattctatacattatcttctaagatttttt 273
|||||||||||||||||||||||||||||||||
Sbjct: 118 agaaattctatacattatcttctaagatttttt 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
