NNNNTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGA
ATCCGCGGAATTCTCCTACCCTTTCAATTGAGCAAGGTCAGATTATAACA
GCTGAAACTCTGACCCATGGACTCAAGAACTGGACTGAATATAATGAGGA
ACATTCCAAAAAATTTAACAAGTAGAAAAATAGCCTGGTGTGTGTCTTTG
AGAGCAAGCTGCTCAATGTCAGCAAGCCCGAGGCACTATGAAAACCACAA
GGTCAGTTCCACTGAACCAGGGTTTTCAAATATTGTCCTATTTCTCTATT
CCGTTGAAAATAGAATCTTTTCTATTGACTTAAAAGGAAAAAAAAAAGGT
TTTAATTTCTCCAGAAAAATAATTGGAGGGATTTAGGTCTGACTAAAGCC
TGTCAGGACAAACTCCAGGCATCCCATTTGCTTCTTTGATGAACTTGCTG
AGGACAAAAGACTCCAGATGTATAATACAAGGGCGAACCTCAAAAGGCAA
ATCTCCCCCCCTTTTTTTTCTGATTATGTAAAGACCAATATGGGGATACA
AAAGACACTAACCACATGAGCATTTTTAAGCCCAAAGTTGTCGGAGCTAA
AAAAAAAAAAAAAAAGGGTATATTTTGAGAAGAGGCAATGAATTGACTAA
GTTAACCAAGGAAGTGCACAGCACTTCAGGTTTAAGTCCGAGTCTGAAAG
CACCGTTTTCTCCTTGTGCTTGGNGTGAGCCCTTCAGCAGCAGGAGTGG

NAAATTNNACGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTAGAACTCCAGCAC
TACATACACACACACACACAGACACACACACACAGACACACACTCGCACG
CGCATGTGTGAATGTCTGTGTATGTATATAGGTATATACATAATAAGAGA
GGGTTTACCAGAAATTTATGATGATTTACTATGAGAAAGCTCTATTATGT
TATCTATTACATTGAAAGATTAAAGATCAAAAATATATGATACTGATAGT
AAAAGAAGTAGGTGAGCTTTGGACAAAATTCAAAACATATTCATAAGAAA
ATACTTGTATTAGGTTAGGAATGTAAAGGTAATTTATTCACCTAACTAAA
ATGTTTATGTATGTATGTGGGCATATATGTATGTATGTATGTATGTATGT
ATGCATATTGGCATTTGTATATGAAGCTTACTCTACAAAGAATCTTCTAT
ACCCCTTGAAATCTGTTAAAGACCAAGAAAGCCACTATCCAAATCTTACT
GAGCATTGAAATCATTCCAGGGGGGTCCCTATAAGAATAAAAGAAACCAT
TTTATTTTTTTTTAAGAAAAATAGGATAGTATTTCCCCCATAATATGTTA
AATATAAATAAGGGGAAACTTTTCTACCAGGGGAGAAAAATTTCCCTTTG
GGGAAATTACCCCCCCAAAAATTTTTCCCCCCCCGGAAGCCCCAATTGGA
GGTCCTTTTACGAAAGGGG

Query= MSMg01no449_f23.b1 MSMg01no449_f23.b1 CHROMAT_FILE:
MSMg01no449_f23.b1 PHD_FILE: MSMg01no449_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:59 2005
         (574 letters)



>mm_chr10_90365949_90366917
          Length = 969

 Score = 1064 bits (550), Expect = 0.0
 Identities = 567/574 (98%), Gaps = 5/574 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagcaaggtcagattataacagctgaaactctgacccatggactcaagaactggactgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gagcaaggtcagattataacagctgaaactctgacccatggactcaagaactggactgaa 710

                                                                       
Query: 61  tataatgaggaacattccaaaaaatttaacaagtagaaaaatagcctggtgtgtgtcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tataatgaggaacattccaaaaaatttaacaagtagaaaaatagcctggtgtgtgtcttt 650

                                                                       
Query: 121 gagagcaagctgctcaatgtcagcaagcccgaggcactatgaaaaccacaaggtcagttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gagagcaagctgctcaatgtcagcaagcccgaggcactatgaaaaccacaaggtcagttc 590

                                                                       
Query: 181 cactgaaccagggttttcaaatattgtcctatttctctattccgttgaaaatagaatctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cactgaaccagggttttcaaatattgtcctatttctctattccgttgaaaatagaatctt 530

                                                                       
Query: 241 ttctattgacttaaaaggaaaaaaaaaaggttttaatttctccagaaaaataattggagg 300
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttctattgacttaaaagg--aaaaaaaaggttttaatttctccagaaaaataattggagg 472

                                                                       
Query: 301 gatttaggtctgactaaagcctgtcaggacaaactccaggcatcccatttgcttctttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gatttaggtctgactaaagcctgtcaggacaaactccaggcatcccatttgcttctttga 412

                                                                       
Query: 361 tgaacttgctgaggacaaaagactccagatgtataatacaagggcgaacctcaaaaggca 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgaacttgctgaggacaaaagattccagatgtataatacaagggcgaacctcaaaaggca 352

                                                                       
Query: 421 aatctcccccccttttttttctgattatgtaaagaccaatatggggatacaaaagacact 480
           | |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 actctcccccc--tttttttctgattatgtaaagaccaatatggggatacaaaagacact 294

                                                                       
Query: 481 aaccacatgagcatttttaagcccaaagttgtcggagctaaaaaaaaaaaaaaaaagggt 540
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 293 aaccacatgagcatttttaagcccaaagttgtcggagct-aaaaaaaaaaaaaaaagggt 235

                                             
Query: 541 atattttgagaagaggcaatgaattgactaagtt 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 234 atattttgagaagaggcaatgaattgactaagtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 969
Length adjustment: 10
Effective length of query: 564
Effective length of database: 959
Effective search space:   540876
Effective search space used:   540876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)