Query= MSMg01no449_g20.b1 MSMg01no449_g20.b1 CHROMAT_FILE:
MSMg01no449_g20.b1 PHD_FILE: MSMg01no449_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:03 2005
(524 letters)
>mm_chr10_14416227_14417150
Length = 924
Score = 982 bits (508), Expect = 0.0
Identities = 514/516 (99%)
Strand = Plus / Plus
Query: 9 gaattctctgggatggccaagaaggaaattaaagttgaggggttgcacagactgtatttc 68
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattctctgggatggcaaagaaggaaattaaagttgaggggttgcacagactgtatttc 268
Query: 69 tgcaatcccagcttttttctgaagagctttatttaaacaaaggagaatactcgaattact 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgcaatcccagcttttttctgaagagctttatttaaacaaaggagaatactcgaattact 328
Query: 129 aaaatgactacagtatagaacaaaacatgggtgtccttatgcctgcacaaataaaaataa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaaatgactacagtatagaacaaaacatgggtgtccttatgcctgcacaaataaaaataa 388
Query: 189 tgcagcacatgctggcgaggatgtggagaaagaggagcactcctccattgctggtgggat 248
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgcagcacatgccggcgaggatgtggagaaagaggagcactcctccattgctggtgggat 448
Query: 249 tgcaagctggtacaaccactctggaagtcagtctggaggttcctcagaaaattggaagac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgcaagctggtacaaccactctggaagtcagtctggaggttcctcagaaaattggaagac 508
Query: 309 ccagctatatcactcttgggaatatacccaaaagatgccccaccatgcccagaagcacat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccagctatatcactcttgggaatatacccaaaagatgccccaccatgcccagaagcacat 568
Query: 369 gttccactatattcatatcaccttatttgtgatagccagaagctggaaacaacccaaatg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gttccactatattcatatcaccttatttgtgatagccagaagctggaaacaacccaaatg 628
Query: 429 tcccataacagaaaaatggatacagaaaacgtggttcatttacacaatggaatactactc 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tcccataacagaaaaatggatacagaaaacgtggttcatttacacaatggaatactactc 688
Query: 489 agctattaagaacaacaacatcttgagttttgcagg 524
||||||||||||||||||||||||||||||||||||
Sbjct: 689 agctattaagaacaacaacatcttgagttttgcagg 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_g20.g1 MSMg01no449_g20.g1 CHROMAT_FILE:
MSMg01no449_g20.g1 PHD_FILE: MSMg01no449_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:03 2005
(459 letters)
>mm_chr10_14592124_14592982
Length = 859
Score = 530 bits (274), Expect = e-155
Identities = 315/340 (92%), Gaps = 20/340 (5%)
Strand = Plus / Minus
Query: 136 acatacatacttatgtacattatgtacatgtatgtatgcaatatattcataataatgtac 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 acatacatacttatgtacattatgtacatgtatgtatgcaatatattcataataatgtac 790
Query: 196 acatatttgtatgtcatatatagtgtgtattgcactatttatattatatatactgtatcc 255
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 acatatttgtatgtcatatatagtgtgtattgcactatttatattatatatactgtatct 730
Query: 256 atatatagtgtatacacacacacacacacacatgcatgcactt----------------g 299
| |||||||||||||||| | |||||||||||||||||||| |
Sbjct: 729 acatatagtgtatacaca---a-acacacacatgcatgcacttgcacatgcacacacaag 674
Query: 300 cacatgcacacacaatgcaagaaaaaaagaaacatacattatcttagctggaacgctaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 673 cacatgcacacacaatgcaagaaaaaaagaaacatacattatcttagctggaaagctaca 614
Query: 360 tctccaaaggttttttttaaaagatatactaagttctgattttttcttcctccatttccc 419
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 613 tctccaaaggtttcttttaaaagatatactaagttctgattttttcttcccccatttccc 554
Query: 420 ccaaaataattatactccacaaagaaaggaagcagtagac 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccaaaataattatactccacaaagaaaggaagcagtagac 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
