Query= MSMg01no450_a19.b1 MSMg01no450_a19.b1 CHROMAT_FILE:
MSMg01no450_a19.b1 PHD_FILE: MSMg01no450_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:50 2005
(553 letters)
>mm_chr10_4934229_4935181
Length = 953
Score = 1023 bits (529), Expect = 0.0
Identities = 547/553 (98%)
Strand = Plus / Plus
Query: 1 ctaatgatgtgttgggcatgaagtagtaccctctataggcaaacagaccttcctgtcctt 60
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 201 ctaatgatgtgttgggcatgaagtagttccctctgtaggcaaacagaccttcctgtcctt 260
Query: 61 taattgcatgcaaaaatgaccatttgaagaagagcctctcagccaatagtttctgagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattgcatgcaaaaatgaccatttgaagaagagcctctcagccaatagtttctgagagt 320
Query: 121 cctggtattttattgagcttcatttccttcttacaaagagagatgtttgaatgtaagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggtattttattgagcttcatttccttcttacaaagagagatgtttgaatgtaagcat 380
Query: 181 atctgcatctctcttttcagcagccaccatcaggggcctgctggagagcctctattgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctgcatctctcttttcagcagccaccatcaggggcctgctggagagcctctattgcag 440
Query: 241 tcatatctgatcacagtcctcagatgattcgtgaagtaatttcagttagtaaccggctgc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatatctgagcacagtcctcagatgattcgtgaagtaatttcagttagtaaccggctgc 500
Query: 301 tgctctcaggcccagtttccagtgtgtgtcaaaaacagaggctgacaggatagctgctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctctcaggcccagtttccagtgtgtgtcaaaaacagaggctgacaggatagctgctac 560
Query: 361 aggaggctgtcagtcacattcacggttcactgtgacagaagtcagggaagatgactgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggaggctgtcagtcacattcacggttcactgtgacagaagtcagggaagatgactgtga 620
Query: 421 caaaggccagggaagatgagtggccacactgacctctcctttccaggagacagacgaggg 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 caaaggccagggaagatgagtggccacactgacctctccttcccaggagacagacgaggg 680
Query: 481 gcatttcccctgtgaggccacaactgtacagtcatcactcgctcatttgcgagcgtgaag 540
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 681 gcatttcccctgtgaggccacaactgtacagtcatcactcgttcatttgtgagcgtgaag 740
Query: 541 gctacccaataag 553
|||||||||||||
Sbjct: 741 gctacccaataag 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_a19.g1 MSMg01no450_a19.g1 CHROMAT_FILE:
MSMg01no450_a19.g1 PHD_FILE: MSMg01no450_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:50 2005
(424 letters)
>mm_chr10_5113255_5114078
Length = 824
Score = 746 bits (386), Expect = 0.0
Identities = 415/430 (96%), Gaps = 10/430 (2%)
Strand = Plus / Minus
Query: 1 acttataggcctagacctttaggtacagaattaacattacaatacatagccacatgtgg- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 495 acttataggcctagacctttaggtacagaattaacattacaatacatagccaca----ga 440
Query: 60 -----tctcaagactatatgcaatgaaaatatgaacactaaggtctgtgtttattaaata 114
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 439 ccaaacctcaagactatatgcaatgaaaatatgaacactaaggtctgtgtttattaaaca 380
Query: 115 gacttcctggttttgtgggctaaaggtcagctgtcttgcttgtatataatgaatgtttca 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gacttcctggttttgtgggctaaaggtcagctgtcttgcttgtatataatgaatgtttca 320
Query: 175 tatgaaaatggccatgcagaactctgaaaatatacttgaaattttatttatttacttact 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tatgaaaatggccatgcagaactctgaaaatatacttgaaattttatttatttacttact 260
Query: 235 gagatggggtcttgttatagtgcctgggctagtcttgacctcccgggctcaagccatttt 294
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagatggggtcttgctacagtgcctgggctagtcttgacctcccgggctcaagccatttt 200
Query: 295 ccctccctagcccccaagtagagaagactacaggtacacattactgtgctcagcacatgt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ccctccctagcccccaagtagagaagactacaggtacacattactgtgctcagcacatgt 140
Query: 355 ttctctgcagctcatactctcttattgcttaagtggctgccccagtactaaggattcaca 414
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttctctgcaactcatactctcttattgcttaagtggctgccccagtactaaggattcaca 80
Query: 415 acgcccctgg 424
||||||||||
Sbjct: 79 acgcccctgg 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
