Query= MSMg01no450_a24.b1 MSMg01no450_a24.b1 CHROMAT_FILE:
MSMg01no450_a24.b1 PHD_FILE: MSMg01no450_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:51 2005
(565 letters)
>mm_chr10_72421248_72422212
Length = 965
Score = 766 bits (396), Expect = 0.0
Identities = 437/454 (96%), Gaps = 9/454 (1%)
Strand = Plus / Minus
Query: 121 acacctttgtagtctactttccctaacaacttaaaagttttaagaacgtttgcttttgct 180
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 965 acacctctgtagtctactttccctaacaacttaaaagttttaagaacatttgcttttgct 906
Query: 181 ataatagggaccttgcgtattgaaaatagttattccctt--aaaaaacaaac-aaaaacc 237
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 905 ataatagggaccttgcgtattgaaaatagttattcccttaaaaaaaacaaacaaaaaacc 846
Query: 238 caaccaaacaaaacaagaaacaacaacaacaa----aaaaaaaacagtacacagtgcacc 293
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 845 caaccaaacaaaacaagaaacaacaacaacaacaacaaaaaaaacaatacacagtgcacc 786
Query: 294 --aaaaaaaattaagataaacatatgtacaatcttccttttattaatgatgaaacctgat 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aaaaaaaaaattaagataaacatatgtacaatcttccttttattaatgatgaaacctgat 726
Query: 352 gtaatttttattctaagaatcttacctgggaatgtatcactgtagacaaatccttgcagg 411
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 725 gtaatttttattctaagaatcttacctaggaatgtatcactaaagacaaatccttgcagg 666
Query: 412 cacactaatgggaacagaacactgaaggaaatcttgcagctgttgctcatcctcatgatg 471
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cacacgaatgggaacagaacactgaaggaaatcttgcagctgttgctcatcctcatgatg 606
Query: 472 agcctggaagagaaggtgatgtcagctgaagtgtgcacagctggagacgcactgtgcatg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agcctggaagagaaggtgatgtcagctgaagtgtgcacagctggagacgcactgtgcatg 546
Query: 532 cgcctttgaaataggtatttctcaacagaccatc 565
|||||||||||||||||||| |||||||||||||
Sbjct: 545 cgcctttgaaataggtatttttcaacagaccatc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_a24.g1 MSMg01no450_a24.g1 CHROMAT_FILE:
MSMg01no450_a24.g1 PHD_FILE: MSMg01no450_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:51 2005
(535 letters)
>mm_chr10_72322638_72323574
Length = 937
Score = 1027 bits (531), Expect = 0.0
Identities = 535/537 (99%), Gaps = 2/537 (0%)
Strand = Plus / Plus
Query: 1 tcttaaatctttggcaacttgaagagctgatgggtttgatgttggtaagaaacactgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaaatctttggcaacttgaagagctgatgggtttgatgttggtaagaaacactgaca 260
Query: 61 caatgatgcggttcacctcacagggcagcgacatcacatcatcactgttctactgtgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatgatgcggttcacctcacagggcagcgacatcacatcatcactgttctactgtgaat 320
Query: 121 atttttgcaggcacacattatagctgcctgaactttgagagatagactttgcattataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttttgcaggcacacattatagctgcctgaactttgagagatagactttgcattataag 380
Query: 181 agaaaaaaataatactattttgtgtatgccataagtgtgagtatccacattggaaaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaaaaaataatactattttgtgtatgccataagtgtgagtatccacattggaaaatag 440
Query: 241 ttctgatgaattctggtgtgattcataaccttaccctgaggaagtggagctgtggtccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgatgaattctggtgtgattcataaccttaccctgaggaagtggagctgtggtccct 500
Query: 301 tgatagccctggtacagatcttacttctctattgaaaggataacctttgttattgataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatagccctggtacagatcttacttctctattgaaaggataacctttgttattgataat 560
Query: 361 aactggatggcaatgttgatggttttacagaaagtgaaaaatgtcgatttaattctcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactggatggcaatgttgatggttttacagaaagtgaaaaatgtcgatttaattctcttt 620
Query: 421 tctgaatacaattagtagcaaaaacattaacttttttt--atttaaaagaagtatatttt 478
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tctgaatacaattagtagcaaaaacattaactttttttttatttaaaagaagtatatttt 680
Query: 479 ccttcctcttaaaagtagcatacttaactactaatcattttaaaccattagccctta 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccttcctcttaaaagtagcatacttaactactaatcattttaaaccattagccctta 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 937
Length adjustment: 10
Effective length of query: 525
Effective length of database: 927
Effective search space: 486675
Effective search space used: 486675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
