Query= MSMg01no451_o20.b1 MSMg01no451_o20.b1 CHROMAT_FILE:
MSMg01no451_o20.b1 PHD_FILE: MSMg01no451_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:21 2005
(685 letters)
>mm_chr10_99104066_99105150
Length = 1085
Score = 1297 bits (671), Expect = 0.0
Identities = 679/683 (99%), Gaps = 4/683 (0%)
Strand = Plus / Plus
Query: 5 gaattctttaatccc--gctattctcaagttcttactctttttgtttcccacactggtta 62
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaa--ccaagctattctcaagttcttactctttttgtttcccacactggtta 262
Query: 63 aaactcgtcctttcacaaaaaaacccaaattctaaattctatcaaaggaatttggtctaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaactcgtcctttcacaaaaaaacccaaattctaaattctatcaaaggaatttggtctaa 322
Query: 123 ttatcttacccggcaccttcgcaaccaaagaaaattaaatcgaagaaaaagacctggatc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttatcttacccggcaccttcgcaaccaaagaaaattaaatcgaagaaaaagacctggatc 382
Query: 183 tgacacaaaatatccagagaaccttgagtaattaatttccttctcctcttcctggcctca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgacacaaaatatccagagaaccttgagtaattaatttccttctcctcttcctggcctca 442
Query: 243 ttatcctcagtgatacatggaaactaaggaccagaaaagccgactgcactgcagttctgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttatcctcagtgatacatggaaactaaggaccagaaaagccgactgcactgcagttctgt 502
Query: 303 ggggtgcaggctctaacttcgaacggagaacgcgccctttgaccactagtcgtccttctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggggtgcaggctctaacttcgaacggagaacgcgccctttgaccactagtcgtccttctt 562
Query: 363 gtgcagaagatgagaatgcttcctctggcgctgcaaagcagacggaagtgttttcagttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtgcagaagatgagaatgcttcctctggcgctgcaaagcagacggaagtgttttcagttg 622
Query: 423 gctggtacccagaagagaaaactcgccccattcactatgctgaccttcgtttgcttatta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gctggtacccagaagagaaaactcgccccattcactatgctgaccttcgtttgcttatta 682
Query: 483 tctttgtattttcccagagaggtccatatacatagatctgcattacaaagaggatgacat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tctttgtattttcccagagaggtccatatacatagatctgcattacaaagaggatgacat 742
Query: 543 ttttaaaataagctaacttctctgtagtatggttagccattaattctttcctttgtagga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttttaaaataagctaacttctctgtagtatggttagccattaattctttcctttgtagga 802
Query: 603 agtgttcattaaactccaggtgaaggggtttaagtcccagaaggtagtgatcaaacgaac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agtgttcattaaactccaggtgaaggggtttaagtcccagaaggtagtgatcaaacgaac 862
Query: 663 ataagtgaataataagtggattt 685
|||||||||||||||||||||||
Sbjct: 863 ataagtgaataataagtggattt 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_o20.g1 MSMg01no451_o20.g1 CHROMAT_FILE:
MSMg01no451_o20.g1 PHD_FILE: MSMg01no451_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:21 2005
(661 letters)
>mm_chr10_99258828_99259888
Length = 1061
Score = 677 bits (350), Expect = 0.0
Identities = 365/370 (98%)
Strand = Plus / Minus
Query: 291 atacacaccttatcattaactgcagtcatcctgcaggtgagaaaacctcccttcttcttc 350
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 860 atacacaccttatcattaactgcagtcatcctgcaggtgagaaaacctcccttcttctcc 801
Query: 351 gttttcttggggtggcacttactccgaactgtgatctctggctgagcaaaggagggtgaa 410
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gttttcctggggtggcccttactccgaactgtgatctctggctgagcaaaggagggtgaa 741
Query: 411 gcatgtggcacagctgcattccatatatgtctggtgggcctgttgtggctatgatttatt 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcatgtggcacagctgcattccatatatgtctggtgggcctgttgtggctatgatttatt 681
Query: 471 tgtccattttacagcccacatgtctttatgtaggacacaatactcctaatgttcaccgta 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtccattttacagcccacatgtctttatgtaggacacaatactcctaatgttcaccgta 621
Query: 531 cgtcctgtggcttagttacttaccctggccttaaatatttactaaatacaaactacatgc 590
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 620 catcctgtggcttagttacttaccctggccttaaatatttacttaatacaaactacatgc 561
Query: 591 cacgtctgcctgtgttttcaattccccattgcttagtgatatatggattgttcatttgta 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacgtctgcctgtgttttcaattccccattgcttagtgatatatggattgttcatttgta 501
Query: 651 tgatttcttc 660
||||||||||
Sbjct: 500 tgatttcttc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
