Query= MSMg01no452_h23.b1 MSMg01no452_h23.b1 CHROMAT_FILE:
MSMg01no452_h23.b1 PHD_FILE: MSMg01no452_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:04 2005
(674 letters)
>mm_chr10_35666541_35667614
Length = 1074
Score = 1085 bits (561), Expect = 0.0
Identities = 631/675 (93%), Gaps = 35/675 (5%)
Strand = Plus / Plus
Query: 1 gtaagggaaaggaaatgaaactgataacagaaggtagatttaaaaaaaaaatcccctctc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaagggaaaggaaatgaatctgataacagaaggtagatttaaaaaaaaaatcccctctc 260
Query: 61 acccaaggagaaaaatcctgttacagaactttaagatgcaagaagtgagataatgtccag 120
|||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||
Sbjct: 261 acccaaggagaaaaatcctgttacagaactttaacatacaagaagtgagataatgttcag 320
Query: 121 gtactcttaataaagcagaagtattctaaatgatatattacttaaatattggttaatatt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gtactcttaataaagcagaagtattctaaatgatatattccttaaatattggttaatatt 380
Query: 181 ccctgtcctgcctccagccctttccatgctccccatttgcttcctgtcaaattcatgtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctgtcctgcctccagccctttccatgctccccatttgcttcctgtcaaattcatgtcc 440
Query: 241 tcattttcttttactgtgattgttatatacaacacatttaatcatatgtaaatataatct 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 tcattttcttttactgtgattgttatatacaacacatgtaatcatatgtaaatataatct 500
Query: 301 tcagaatctgactgtgtttattataggaatatgatttcaagtctagccatttgatatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagaatctgactgtgtttattataggaatatgatttcaagtctagccatttgatatttg 560
Query: 361 atagtcagttagggattcatcactggggaagcctaatactaattc-tccctctcttaaca 419
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||
Sbjct: 561 atagtcagttagggattcatcactggggaagcctaatactaattcctcc-tctctcagca 619
Query: 420 gaactttgtttcttcttcttctttttcttcttcttcttcttcttcttcttcttcttcttc 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 620 gaactttgtttcttcttcttctt---cttcttcttcttcttcttcttcttcttcttcttc 676
Query: 480 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 736
Query: 540 ttcctcttcttcttcttctcctttttcttcattatcattgtcattattatttctgggaac 599
|||| |||||||||||||||||||||||||
Sbjct: 737 ------------------------------attaccattgtcattattatttctgggaac 766
Query: 600 ccatgagatttaacctttccatgatatcatgcctactgttgttttacttgtccagatcat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ccatgagatttaacctttccatgatatcatgcctactgttgttttacttgtccagatcat 826
Query: 660 gtttaggaagctata 674
|||||||||||||||
Sbjct: 827 gtttaggaagctata 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 197
Number of extensions: 50
Number of successful extensions: 50
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_h23.g1 MSMg01no452_h23.g1 CHROMAT_FILE:
MSMg01no452_h23.g1 PHD_FILE: MSMg01no452_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:04 2005
(632 letters)
>mm_chr10_35859034_35860065
Length = 1032
Score = 1065 bits (551), Expect = 0.0
Identities = 557/559 (99%)
Strand = Plus / Minus
Query: 71 tataaaactacaccagggggctggagagatggctcagtgggtcagagcactgactgctct 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 tataaaactacaccagggggctggagagatggctcagtgggtcagagcactgactgctct 973
Query: 131 tctgaaggtcctgagttcaaattccagtatccacatggtggctcacaaccatccataacg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 tctgaaggtcctgagttcaaattccagtatccacatggtggctcacaaccatccataacg 913
Query: 191 agatctgacaccctcttctggagtgtctgaagacagctacagtgcacttacatataataa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 agatctgacaccctcttctggagtgtctgaagacagctacagtgcacttacatataataa 853
Query: 251 ataaataaatcttttttaaaaaactacaccaaatatgcattttattgcacaaaagcttaa 310
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ataaataaatcttttaaaaaaaactacaccaaatatgcattttattgcacaaaagcttaa 793
Query: 311 ggtaatgagagaagaggctaaaattcggtcattgtggacaaagtcggtcatacagaattt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ggtaatgagagaagaggctaaaattcggtcattgtggacaaagtcggtcatacagaattt 733
Query: 371 atgtttctgaattttatcattcagtagttctcccataatttatctagctatttttcagac 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atgtttctgaattttatcattcagtagttctcccataatttatctagctatttttcagac 673
Query: 431 tctttcattgttgagcctaaatatttctccaggttattcatttcctggtatcaagtactc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tctttcattgttgagcctaaatatttctccaggttattcatttcctggtatcaagtactc 613
Query: 491 aggtgtaggaagataccatcttcatgaacctcatctacctctgaggtgagaatccacagc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aggtgtaggaagataccatcttcatgaacctcatctacctctgaggtgagaatccacagc 553
Query: 551 atgttgatttttcaaactgtagttttaaagtaaatatgtaacagaagagcaattaataat 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atgttgatttttcaaactgtagttttaaagtaaatatgtaacagaagagcaattaataat 493
Query: 611 agtagaggtacttgactga 629
|||||||||||||||||||
Sbjct: 492 agtagaggtacttgactga 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
