Query= MSMg01no453_l09.b1 MSMg01no453_l09.b1 CHROMAT_FILE:
MSMg01no453_l09.b1 PHD_FILE: MSMg01no453_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:40 2005
(583 letters)
>mm_chr10_95952724_95953706
Length = 983
Score = 797 bits (412), Expect = 0.0
Identities = 439/454 (96%), Gaps = 10/454 (2%)
Strand = Plus / Plus
Query: 140 gtctctacaggattaggtgcatcctctcccactgaggccagacaaggcagtcttctgcta 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtctctacaggattaggtgcatcctctcccactgaggccagacaaggcagtcttctgcta 389
Query: 200 catatgtgccagggccatggaccagcccatgtatgctctttggttggtggcttagtcatt 259
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 390 catatgtgcaagggccatggaccagcccatatatgctctttggttggtggcttagtcatt 449
Query: 260 cagagctcccaggggtctaggttagttgatactgttggtcttcctatagggttgccatcc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cagagctcccaggggtctaggttagttgatactgttggtcttcctatagggttgccatcc 509
Query: 320 cttttagttccttgagtccttcccctaactcttccatagaacttcatacaaagtgtgtgt 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cttttagttccttgagtccttcccctaactcttccatagaacttcatacaaagtgtgtgt 569
Query: 380 gtgtgtgtgtgtgtgt----------cttttttctagaggttaggtatgtagtttcataa 429
|||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 570 gtgtgtgtgtgtgtgtgtgtgtgtgtcttttttctagaggttaggaatgtagtttcataa 629
Query: 430 atatacaaaaagcctattaagatacctcccagagaaggtaaacaagccaacaaagcaagc 489
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 630 atatacaaaaagcctattaagatacctcccagagaaggtaaacaagccaacaaagcaaac 689
Query: 490 caaccaactatagcaacaaaaacttgtaagaaatgcatgggatcctcattcattccatct 549
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 690 caaccaactatagcaacaaaaacttgtaagaaatgcatgggatcctcactcattccatct 749
Query: 550 gactgacattttgttgaagccaggctttggctca 583
||||||||||||||||||||||||||||||||||
Sbjct: 750 gactgacattttgttgaagccaggctttggctca 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_l09.g1 MSMg01no453_l09.g1 CHROMAT_FILE:
MSMg01no453_l09.g1 PHD_FILE: MSMg01no453_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:40 2005
(600 letters)
>mm_chr10_96128574_96129573
Length = 1000
Score = 1137 bits (588), Expect = 0.0
Identities = 597/600 (99%)
Strand = Plus / Minus
Query: 1 cttccagaagtagacagggtttgggcgtggcttctggaaacacctagcacgtttacctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cttccagaagtagacagggtttgggcgtggcttctggaaacacctagcacgtttacctgt 614
Query: 61 ctttaaggtgttacatgtgaccatctgtaaatgacttaacacagtctgacctcttaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctttaaggtgttacatgtgaccatctgtaaatgacttaacacagtctgacctcttaattc 554
Query: 121 tgccttttttgtcaccttttcctcatataaatatttcaggtttccatagctctgctagtt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgccttttttgtcacctttttctcatataaatatttcaggtttccatagctctgctagtt 494
Query: 181 cattataaatacattcattcaggtcctgctagaaaatactccgtgttgccccttggatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cattataaatacattcattcaggtcctgctagaaaatactccgtgttgccccttggatcc 434
Query: 241 cattcgcccaacagaaggtgcattgaatttgcctgggaaatagggacaatgtcttattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cattcgcccaacagaaggtgcattgaatttgcctgggaaatagggacaatgtcttattgt 374
Query: 301 aaaaatgtattgcatttctccatctcccttcagagggcttttagatatataagaatgtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaaaatgtattgcatttctccatctcccttcagagggcttttagatatataagaatgtta 314
Query: 361 agccctgagggaaaaatataaacaggcatatcttatttgctaaaaaacactgccagcatc 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agtcctgagggaaaaatataaacaggcatatcttatttgctaaaaaacactgccagcatc 254
Query: 421 ttgccaggcaatgcagagagcaaacatttatccccacagaattcacacaaacattctttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttgccaggcaatgcagagagcaaacatttatccccacagaattcacacaaacattctttc 194
Query: 481 tttctttctttctttcttttttctccatgcctaaaaggcctcagaagttcaatgtttggt 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tttctttctttcttttttttttctccatgcctaaaaggcctcagaagttcaatgtttggt 134
Query: 541 ttacacataccaagaatacaagaccacagcctgagtttattaataagtgaggtgagaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttacacataccaagaatacaagaccacagcctgagtttattaataagtgaggtgagaaga 74
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
