Query= MSMg01no454_f15.b1 MSMg01no454_f15.b1 CHROMAT_FILE:
MSMg01no454_f15.b1 PHD_FILE: MSMg01no454_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:31 2005
(191 letters)
>mm_chr10_19588676_19589270
Length = 595
Score = 292 bits (151), Expect = 9e-84
Identities = 166/173 (95%), Gaps = 4/173 (2%)
Strand = Plus / Plus
Query: 23 cctcccctcatttattgcccagatcatcagtgacacacaggagagatctcctgagggaag 82
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 223 cctcccctcatttattgcccagatcatcagtgacacacaggagagccctcctgagggaag 282
Query: 83 ctgagccactctcttcctcctctgtcccctgccctctcacactcactcacaggcagagac 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgagccactctcttcctcctctgtcccctgccctctcacactcactcacaggcagagac 342
Query: 143 gtcaggtgagctgagtgcacaccctaagggccg----cagggcccatgtcaga 191
|||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 343 gtcaggtgagctgagtgcacaccctacgggccggccgcagggcccatgtcaga 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 595
Length adjustment: 8
Effective length of query: 183
Effective length of database: 587
Effective search space: 107421
Effective search space used: 107421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_f15.g1 MSMg01no454_f15.g1 CHROMAT_FILE:
MSMg01no454_f15.g1 PHD_FILE: MSMg01no454_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:31 2005
(452 letters)
>mm_chr10_19780825_19781676
Length = 852
Score = 859 bits (444), Expect = 0.0
Identities = 450/452 (99%)
Strand = Plus / Minus
Query: 1 cactgtgagccatggtgagggtcctctggaagagcagccagtgctcttaaccactgagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cactgtgagccatggtgagggtcctctggaagagcagccagtgctcttaaccactgagcc 695
Query: 61 atacatatctgcagccctcacctaaagggtcccacgctggcttggaacttatcaagtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atacatatctgcagccctcacctaaagggtcccacgctggcttggaacttatcaagtagg 635
Query: 121 ctaggctagctggccagtgagcccaaagggccctcctgtctctgcttcccctagcactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctaggctagctggccagtgagcccaaagggccctcctgtctctgcttcccctagcactat 575
Query: 181 aacgccagtggatctggtgttttacaatggtgggactctgcctctcatatctgcacattg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aacgccagtggatctggcgttttacaatggtgggactctgcctctcatatctgcacattg 515
Query: 241 aattctttatggactgggctgtctctccagcttgcttcctccatttttaaatgaaatcaa 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aatactttatggactgggctgtctctccagcttgcttcctccatttttaaatgaaatcaa 455
Query: 301 ttaggaggagataatattttccttgaggaactatgggggctcttcttgctttagaaagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttaggaggagataatattttccttgaggaactatgggggctcttcttgctttagaaagtc 395
Query: 361 tctaagatagacaaggtgcctagaatgccaatacttttgaagctgaggcaggagaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tctaagatagacaaggtgcctagaatgccaatacttttgaagctgaggcaggagaatttt 335
Query: 421 aagtttgaaaccaggtctagatacacagggga 452
||||||||||||||||||||||||||||||||
Sbjct: 334 aagtttgaaaccaggtctagatacacagggga 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
