Query= MSMg01no455_a16.b1 MSMg01no455_a16.b1 CHROMAT_FILE:
MSMg01no455_a16.b1 PHD_FILE: MSMg01no455_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:26 2005
(471 letters)
>mm_chr10_6410975_6411845
Length = 871
Score = 804 bits (416), Expect = 0.0
Identities = 441/452 (97%), Gaps = 5/452 (1%)
Strand = Plus / Minus
Query: 1 attaattctaagggccttctagatttagtgggataagtttgctaaatcagtgtcctgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 attaattctaagggccttctagatttagtgggataagtttgctaaatcagtgtcctgaca 393
Query: 61 gttgttgaaaaaggaacaccatcctgagaatacatctctcctaaactgtgttaatgtgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gttgttgaaaaaggaacaccatcctgagaatacatctctcctaaactgtgttaatgtgac 333
Query: 121 atataagatatggtcttctagagggtcaggtagccatcaatcaaggaaaaaactaagacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttataagatatggtcttctagagggtcaggtagccatcaatcaaggaaaaaactaagacc 273
Query: 181 tcagctcctgtaagtaatcaagatccttacaagagcttagttgatatttataatttgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tcagctcctgtaagtaatcaagatccttacaagagcttagttgatatttataatttgata 213
Query: 241 tatgtagtttgattttttttaaaagatttacttatttattatatgtaagtacactgtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tatgtagtttgattttttttaaaagatttacttatttattatatgtaagtacactgtagc 153
Query: 301 tgtcttcagacactccagaagagggagtcagatctcattatggatggttgtgagccacca 360
||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 152 tgtcttcagacactccagaagagggcgtcagatcttgttacagatggttgtgagccacca 93
Query: 361 tgtggttgctgggatttgaacgtcagaccttcggaagagcagtcgggtgctcttaccca- 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tgtggttgctgggatttgaacgtcagaccttcggaagagcagtcgggtgctcttacccaa 33
Query: 420 ----ctgagccatctcaccagcccctgtagtt 447
||||||||||||||||||||||||||||
Sbjct: 32 cccactgagccatctcaccagcccctgtagtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_a16.g1 MSMg01no455_a16.g1 CHROMAT_FILE:
MSMg01no455_a16.g1 PHD_FILE: MSMg01no455_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:26 2005
(418 letters)
>mm_chr10_6237822_6238639
Length = 818
Score = 750 bits (388), Expect = 0.0
Identities = 407/418 (97%), Gaps = 8/418 (1%)
Strand = Plus / Plus
Query: 1 tttgttttcaagacttaagcagcagcagaggtacagaagggctatctgcctgccttcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttttcaagacttaagcagcagcagaggtacagaagggctatctgcctgccttcagg 260
Query: 61 acacaccaagaggggacctgcccctgtgttctaaagctcacagtgttctgtccatgttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacaccaagaggggacctgcccctgtgttctaaagctcacagtgttctgtccatgttgg 320
Query: 121 acatttatttaccagagtctctgtaccagaaacccacacgggaggtaagggaccgcgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatttatttaccagagtctctgtaccagaaacccacacgggaggtaagggaccgcgttc 380
Query: 181 ttccccatgcatgctggaggtaccattaatgacttgctgaataagagaatgaatgaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccccatgcatgctggaggtaccattaatgacttgctgaataagagaatgaatgaatga 440
Query: 241 atgaatgaatgaatgaattctattgaagaatggagaacagttctgattgtggacgtcagg 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaatgaat--------tctattgaagaatggagaacagttctgattgtggacgtcagg 492
Query: 301 gagtggggattggaggttagccttgtatcttagtatctcggatgcatgatagcaattgaa 360
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 493 gagtggggattggaggttagccttgtatctcagtatctccgatgcctgatagcaattgaa 552
Query: 361 tgtggaatgactaagcataacattgcttcatccagctagaattttcccacctgcaggg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgtggaatgactaagcataacattgcttcatccagctagaattttcccacctgcaggg 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
