Query= MSMg01no455_p23.b1 MSMg01no455_p23.b1 CHROMAT_FILE:
MSMg01no455_p23.b1 PHD_FILE: MSMg01no455_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:39 2005
(545 letters)
>mm_chr10_119789652_119790596
Length = 945
Score = 961 bits (497), Expect = 0.0
Identities = 529/549 (96%), Gaps = 16/549 (2%)
Strand = Plus / Plus
Query: 1 tgatgagacgtaggctcaggtctaaaatcagggtgttcagatggctccattgactgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgatgagacgtaggctcaggtctaaaatcagggtgttcagatggctccattgactgacaa 260
Query: 61 ctatttattcaggcgtatggcagcaatgtctgggaatgtgtctcaagcgaggggttcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatttattcaggcgtatggcagcaatgtctgggaatgtgtctcaagcgaggggttcagg 320
Query: 121 tgacttttaacgagccccaaagtctctaaggaaaaagacttccacattccatttccatgg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacttttaaagagccccaaagtctctaaggaaaaagacttccacattccatttccatgg 380
Query: 181 agagttatcaaaccaaattaggagaacctcccagagaatggcatgcaaagattaaggtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagttatcaaaccaaattaggagaacctcccagagaatggcatgcaaagattaaggtag 440
Query: 241 gaaaacacacttaagccaggcagagggggcccatgcctttaaacccagcacgtcgaagag 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaacacacagaagccaggcagagggggcccatgcctttaaacccagcacgtcgaagag 500
Query: 301 aggaccaggcagatctctggtttgaggccagcctggttctactgagtgagttccaggata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaccaggcagatctctggtttgaggccagcctggttctactgagtgagttccaggata 560
Query: 361 gccagagctacacagagaaaccctgtatccaagagcaaacaaacaaacaaacaaacaaa- 419
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccagagctacacagataaaccctgtatccaagagcaaacaaacaaacaaacaaacaaac 620
Query: 420 ---aaacacacagcagaaaatccaggtgctcaagaggataaagcatcagggtcaccatct 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaaacacacagcagaaaatccaggtgctcaagaggataaagcatcagggtcaccatct 680
Query: 477 aaaccacaggggaaccagaaagacagatggaaagacagatgggagacagcagaggtgaag 536
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 681 aaaccacaggggaaccagaaagacagatgg------------gagacagcagaggtgaag 728
Query: 537 acattaata 545
|||||||||
Sbjct: 729 acattaata 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_p23.g1 MSMg01no455_p23.g1 CHROMAT_FILE:
MSMg01no455_p23.g1 PHD_FILE: MSMg01no455_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:39 2005
(527 letters)
>mm_chr10_119964689_119965615
Length = 927
Score = 986 bits (510), Expect = 0.0
Identities = 519/522 (99%)
Strand = Plus / Minus
Query: 5 aacagttgggccagttaggtgttgccacacaagctacagagaagacaggagtcgtttctc 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aacagctgggccagttaggtgttgccacacaagctacagagaagacaggagtcgtttctc 608
Query: 65 agaattctaggtgggtgctctgtatctagcaaggttctccataagatctcagacctgggc 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 607 agaattctaggtgggtgctctgtatctagcaaggtgctccataagatctcagacctgggc 548
Query: 125 tgagcccatcttttggctccttgggacgtaggttctacgtcaaggtcactgtgctgatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgagcccatcttttggctccttgggacgtaggttctacgtcaaggtcactgtgctgatga 488
Query: 185 ccaacttctaagcagcatgatgggggaagattttcaagtgtgcagtgtctcatgggaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccaacttctaagcagcatgatgggggaagattttcaagtgtgcagtgtctcatgggaaat 428
Query: 245 ctgctatggtctactgaagctttactgcgccagcccttctgtagaggagagaggggaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgctatggtctactgaagctttactgcgccagcccttctgtagaggagagaggggaact 368
Query: 305 gcagggttccagagagactcctgcttcgcccaacacagaactgttgctgctccagaaggg 364
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 367 gcagggttccagagagactcctgcttcgcccaacacagaactgctgctgctccagaaggg 308
Query: 365 atggccttgggtagcaacaccctctgtgtccttttgtgcctcctggagtgtcccagtcag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atggccttgggtagcaacaccctctgtgtccttttgtgcctcctggagtgtcccagtcag 248
Query: 425 aatgaaagaattgttagctttgccttgccctgccttgcctatttcctcttcctcctcctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aatgaaagaattgttagctttgccttgccctgccttgcctatttcctcttcctcctcctc 188
Query: 485 ttcctcttcctccacctcctcctccttttttttttttttttt 526
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttcctcttcctccacctcctcctccttttttttttttttttt 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
