Query= MSMg01no457_d09.b1 MSMg01no457_d09.b1 CHROMAT_FILE:
MSMg01no457_d09.b1 PHD_FILE: MSMg01no457_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:20 2005
(244 letters)
>mm_chr10_88159931_88160575
Length = 645
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 1 gttttgtctcactgtcacaagtcttttacctatatgttctggtttccaattttgcatttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttttgtctcactgtcacaagtcttttacctatatgttctggtttccaattttgcatttt 386
Query: 61 tatgggatttctgctttctctctgtgtgaatgtatgtatcagtgcctatattgtttatta 120
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 385 tatgggatttctgctttctctctgtgtgaatgtatgtgtcagtgcctatattgtttctta 326
Query: 121 tgcttcttctttggctcttttc-ttttttttctcccatttgtttgtttgttgctattcta 179
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcttcttctttggctcttttctttttttttctcccatttgtttgtttgttgctattcta 266
Query: 180 gtgtggatttggttgggtaaggaggagctggggggaggagaaaccataatctgatgatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgtggatttggttgggtaaggaggagctggggggaggagaaaccataatctgatgatat 206
Query: 240 tagaa 244
|||||
Sbjct: 205 tagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_d09.g1 MSMg01no457_d09.g1 CHROMAT_FILE:
MSMg01no457_d09.g1 PHD_FILE: MSMg01no457_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:20 2005
(241 letters)
>mm_chr10_87990436_87991077
Length = 642
Score = 379 bits (196), Expect = e-110
Identities = 223/232 (96%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 11 tctctctctctctctctctctctctctctctctctctctctctctctctctccctctcca 70
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 212 tctctctctctctctctctctctctctctctctctctctctctctctctctccc-ctcta 270
Query: 71 ccccccaccccca-ccccgccccagtgggtacaacagtgctaacacatagcaagaggagt 129
| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 271 ctccccacccccacccccgccccagtggatacaacagtgctaacacatagcaagaggagt 330
Query: 130 aaaaggagtgaatgattgggtccccataatagaaatgaagtgggaagctctgtggatgtg 189
|||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 331 aaaaggagtgaatgtttgggtccccataatagaaatgaagtgggaagccctggggatgtg 390
Query: 190 ggtgaatgctggaacctgctgggggttagcctgtccccttgaagaagcattg 241
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 391 ggtgaatgctggaacctgccgggggttagcctgtccccttgaagaagcattg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
