Query= MSMg01no457_i10.b1 MSMg01no457_i10.b1 CHROMAT_FILE:
MSMg01no457_i10.b1 PHD_FILE: MSMg01no457_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:45 2005
(244 letters)
>mm_chr10_119088619_119089262
Length = 644
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%)
Strand = Plus / Plus
Query: 1 acagctatcaaggcagagcatgggatctttaaaattgagttgacatttacaaaaacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagctatcaaggcagagcatgggatctttaaaattgagttgacatttacaaaaacacac 260
Query: 61 aacttctggcagctttaattattacttaaaagaagagctttaaaactcatcccatccgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttctggcagctttaattattacttaaaagaagagctttaaaactcatcccatccgct 320
Query: 121 acctgagctttgattacgttaaagaggagaaaaagaaccctgataaatttaagaagtgaa 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctgagctctgattacgttaaagaggagaaaaagaaccctgataaatttaagaagtgaa 380
Query: 181 gttcagacaaggagcctgccctgccaggctctctgattcgttttcaggataacttttaca 240
| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gctcagacaaggagtctgccctgccaggctctctgattcattttcaggataacttttaca 440
Query: 241 ttc 243
|||
Sbjct: 441 ttc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_i10.g1 MSMg01no457_i10.g1 CHROMAT_FILE:
MSMg01no457_i10.g1 PHD_FILE: MSMg01no457_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:46 2005
(253 letters)
>mm_chr10_119256241_119256893
Length = 653
Score = 458 bits (237), Expect = e-133
Identities = 251/259 (96%), Gaps = 7/259 (2%)
Strand = Plus / Minus
Query: 1 attccttgcgcacataccaggagaaaggtagtcccagtggggagtgacaaagcttaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 attccttgcgcacataccaggagaaaggtagtcccagtggggagtgacaaagcttaattc 259
Query: 61 ctcttggctgatgcagaggtccgctacatgtcatctggcagagctgtgcctttcagttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctcttggctgatgcagaggtccgctacatgtcatctggcagagctgtgcctttcagttca 199
Query: 121 ctaccaccgccaccaccaccaccaccaccacca------ccactgctgcccgtcacagcc 174
||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 198 ctatcaccgccaccaccaccaccaccaccaccaacaccaccactgctgcccgtcacagcc 139
Query: 175 tcctcccctgctctcatcacaatggcttataaaataaggctgtttcgtagcaacaaagca 234
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tcctcccctgctc-catcacaatggcttataaaataaggctgtttcgtagcaacaaagca 80
Query: 235 gcagataggagaactagga 253
|||||||||||||||||||
Sbjct: 79 gcagataggagaactagga 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
