XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGTAATGTACAGCATTCAGGTACATGCGAGGCTGCCCCCAAACTGGGGGA
GTTTGTTTATCTCTGTTGTTCTCCACTGGTTCATGTTAACTGGATCTTTC
TAATGTACAATGCTGGGGAGACAAACTGAGTTATGGGTGTATAGTATGAA
AATATGTGAATTGTGTCTGAATTTCTGTAAAAATAAACCAAATGCAATGA
ATTTCATCAAGGATTATATTAGTCATAGATCCTAGTGATGGCTAAATTTT
TATGTCAACGGAATTCTGTCTACAGAATCGATAAAGTATCATTTTATGGC
ATGTTTGTGAGGGTCTTCTATCTATCTATCTATCTATCTATCTATCTATC
TATCTATCTATCTATCTATATATCTGTCTGTCTGTCTGTCTGTCTTCTAT
CCCTCCATTCCTCTGTCCCTCCCTCCCTCCCTTTCTCCTTCCTTTCTTCC
TTCCTTGATCTCCTATGTTCCATCCTGGCCTTGATCTTTCTATATCACTG
AACGTACTCTATGTAGCTCCTTTATAAGATTTTTATTCTAGGAACTGGCA
TACAAGTCTCAGTGAATAAGTGTAGGAAAACTTCCCTCCTTGTGTGAGGG
TACTGTCCATTGGCTGGGAAGAACATACTGAATATAACAAAATGGGAAGG
ATAAATTGATTTTTCTCTTTCAAAAACAGGGACCCTTTTTCCTTAAAAGA
AAAATTCTGGCCTTCTACTTN

GATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGC
ACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAA
ACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAA
CTTAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGGGGAACACTCC
TCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTC
TGGCGGTTACTCAGAAAATTGGACATAGTACTACCGGAGGATCCCGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGAACA
CATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCCAGAAGCTGG
AAAGAACCCAGATGCCCTTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATTTACACAATGGAATACTACTCAGCTATTATAAAAAATGAATTTATGA
AATTCCTAGGCCAATGGATGGACCTGTAGGGTATCATCCTGAGTGAAAGA
AACCCATCCCCAAGGAATTCGCCCAAATGTACTCCCTGGAAAGGGGCTTT
TACCCCCAAACTTAGATACCCCCCATTTAAAAAAAACTTGCCCAAGGCGG
GAATTCTTAAAAAAAAAACAAAAAGGTGGAGCTTTTCCCTTTTTTTAAAG
GGGACAAACACCCCTGGGG

Query= MSMg01no459_a15.b1 MSMg01no459_a15.b1 CHROMAT_FILE:
MSMg01no459_a15.b1 PHD_FILE: MSMg01no459_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:48 2005
         (524 letters)



>mm_chr10_87205030_87205953
          Length = 924

 Score =  774 bits (400), Expect = 0.0
 Identities = 484/526 (92%), Gaps = 23/526 (4%)
 Strand = Plus / Minus

                                                                       
Query: 8   ttcagtaatgtacagcattcaggtacatgcgaggctgcccccaaactgggggagtttgtt 67
           |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 526 ttcagtaatgtatagcattcaggtacatgcgaggctgcccccaacctgggggagtttgtt 467

                                                                       
Query: 68  tatctctgttgttctccactggttcatgttaactggatctttctaatgtacaatgctggg 127
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 466 tatctctgttgttctccactggttcatattaactggatctttctaatgtacaatgctggg 407

                                                                       
Query: 128 gagacaaactgagttatgggtgtatagtatgaaaatatgtgaattgtgtctgaatttctg 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gagacaaactgagttatgggtgtatagtatgaaaatatgtgaattgtgtctgaatttctg 347

                                                                       
Query: 188 taaaaataaaccaaatgcaatgaatttcatcaaggattatattagtcatagatcctagtg 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 taaaaataaaccaaatgcaatgaatttcatcaaggattatattagtcatagatcctagtg 287

                                                                       
Query: 248 atggctaaatttttatgtcaacggaattctgtctacagaatcgataaagtatcattttat 307
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atggctaaatttttatgtcaatggaattctgtctacagaatcgataaagtatcattttat 227

                                                                       
Query: 308 ggcatgtttgtgagggtcttc---tatcta--------------------tctatctatc 344
           |||||||||||||||||||||   ||||||                    ||| ||| ||
Sbjct: 226 ggcatgtttgtgagggtcttcttttatctatctctctctctctctctctctctctctctc 167

                                                                       
Query: 345 tatctatctatctatctatctatctatctatctatatatctgtctgtctgtctgtctgtc 404
           | ||| ||| ||||| ||| ||| ||| ||| ||||||| | | | | ||||||||||||
Sbjct: 166 tctctctctctctatatatatatatatatatatatatatatatatatatgtctgtctgtc 107

                                                                       
Query: 405 ttctatccctccattcctctgtccctccctccctccctttctccttcctttcttccttcc 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ttctatccctccattcctctgtccctccctccctccctttctccttcctttcttccttcc 47

                                                         
Query: 465 ttgatctcctatgttccatcctggccttgatctttctatatcactg 510
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  ttgatctcctatgttccatcctggccttgatctttctatatcactg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)