Query= MSMg01no459_e12.b1 MSMg01no459_e12.b1 CHROMAT_FILE:
MSMg01no459_e12.b1 PHD_FILE: MSMg01no459_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:09 2005
(474 letters)
>mm_chr10_113848757_113849630
Length = 874
Score = 791 bits (409), Expect = 0.0
Identities = 450/465 (96%), Gaps = 6/465 (1%)
Strand = Plus / Plus
Query: 5 gaattctcacttctc--agcaagatatcctgggaattaattccactgcagctggaataat 62
|||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcac--cacgaagcaagatatcctgggaattaattccactgcagctggaataat 262
Query: 63 acaatgatttaaatgataaatgtgtcttctctgtgtcactatcttatttaggtgtgtaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acaatgatttaaatgataaatgtgtcttctctgtgtcactatcttatttaggtgtgtaat 322
Query: 123 gatatttacatttaaagggaattttaaaa-aattctgcaagagtaaagtttcttgttgga 181
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 323 gatatttacatttaaagggaattt-aaaacaattctgcaagagtaaagtttcttgttgga 381
Query: 182 atagcatttacacgtgatttgtggtttttttaaaaataatatatacagaatatataagtt 241
|||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 382 atagcatttatacgtgatttgtgggttttttaaaaataatatatacagaatgtataagtt 441
Query: 242 taatggacagactttgattatatttagttcggtgaatttctaagccaagttgcctggtta 301
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taatggacagattttgattatatttagttcggtgaatttctaagccaagttgcctggtta 501
Query: 302 aacacatcttactctctccatgcattcccattaaggttatctgcctttattacataggag 361
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 502 aacacatcttactctctccatgcattcccattaaggttatctgtctttattacatagggg 561
Query: 362 atagtagagaactgttaaaaatcatgaatttcaaggcatggcagaagctatatttgctaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 562 atagtagagaactgttaaaaatcatgaatttcaaggcatggcagaagctatctttgctaa 621
Query: 422 atattttaaagtcttaatttttcatttggttcacaggcctaaaaa 466
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 622 atattttaaagtcttaatttttcatttggttcacagccctaaaaa 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_e12.g1 MSMg01no459_e12.g1 CHROMAT_FILE:
MSMg01no459_e12.g1 PHD_FILE: MSMg01no459_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:09 2005
(352 letters)
>mm_chr10_113939067_113939818
Length = 752
Score = 634 bits (328), Expect = 0.0
Identities = 347/358 (96%), Gaps = 10/358 (2%)
Strand = Plus / Minus
Query: 1 aaacct--gtatttggaagagcagctcatgctattaaccactgaaccatctctctatccc 58
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 612 aaacctgggtatttggaagagcagctcatgctattaaccactgaaccatctctttatccc 553
Query: 59 ttcttcaagattttaactttcaatgtaacagcatttatttcagaaggcagaactttgaat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttcttcaagattttaactttcaatgtaacagcatttatttcagaaggcagaactttgaat 493
Query: 119 taacatggtgactttcaaaagataagatttgggttttccttctttatgaatagttctaga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taacatggtgactttcaaaagataagatttgggttttccttctttatgaatagttctaga 433
Query: 179 attaaattcaatagttaaaacatgttgcccatgaattaagtggaattgaacaaaatgtgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 attaaattcaatagttaaaacatgttgcccatgaattaagtggaattgaacaaaatgtgc 373
Query: 239 ctta----ttttacaaatgagaactgaaactaacaatctaggaaaactcattaaaccaaa 294
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cttacagg----acaaatgagaactgaaactaacaatctaggaaaactcattaaaccaaa 317
Query: 295 gttctgtagttaataatgtatgagttaaaggaacataatgcagaccctaaaatagcca 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gttctgtagttaataatgtatgagttaaaggaacataatgcagaccctaaaatagcca 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
