Query= MSMg01no459_i08.b1 MSMg01no459_i08.b1 CHROMAT_FILE:
MSMg01no459_i08.b1 PHD_FILE: MSMg01no459_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:28 2005
(277 letters)
>mm_chr10_67013067_67013744
Length = 678
Score = 437 bits (226), Expect = e-127
Identities = 256/278 (92%), Gaps = 20/278 (7%)
Strand = Plus / Plus
Query: 20 ggtgcccactgaagtggttcgaggttcagcacccatgttggggggg-tgtcactgtgaga 78
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 220 ggtgcccactgaagtggttcgaggttcagcacccatgttggggggggtgtcactgtgaga 279
Query: 79 tctgtaaatggtgagccaaccccatttacattccacagtaagagcaactatttggctacg 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tctgtaaatggtgagccaaccccatttacattccacagtaagagcaactatttggctacg 339
Query: 139 taaatggatccttaagattacttgtgtttgagccgagcagtggtggcgcacgtctttaat 198
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 340 taaatggatccttaagattacttgtgtttgagccgggcagtggtggcgcacgtctttaat 399
Query: 199 cccagcactcgggaggcagaggc-------------------aggcttacagagcgagtt 239
||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 400 cccagcactcgggaggcagaggcgggcggatttctgagttcgaggcttacagagtgagtt 459
Query: 240 ccagggatagctagggctacacagagaaaccctgtctc 277
||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccagggatagctagggctacacagagaaaccctgtctc 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no459_i08.g1 MSMg01no459_i08.g1 CHROMAT_FILE:
MSMg01no459_i08.g1 PHD_FILE: MSMg01no459_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:28 2005
(243 letters)
>mm_chr10_67188964_67189606
Length = 643
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Minus
Query: 1 agacctacggaagtgatggagatgcagtcacatctgggaagtcttcccttttggaatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agacctacggaagtgatggagatgcagtcacatctgggaagtcttcccttttggaatgtg 383
Query: 61 cattccacagaggctgagcttgtggcttctcagccgtctcctcggtgactaatgcccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cattccacagaggctgagcttgtggcttctcagccgtctcctcggtgactaatgcccctg 323
Query: 121 atacacggagtctactttctgaattgcttgggattgtctccatatcaaatgtgccaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atacacggagtctactttctgaattgcttgggattgtctccatatcaaatgtgccaactc 263
Query: 181 actggtgtgttcctgaagctctggctatttcataaacagcttgaatgcaattcaccctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 actggtgtgttcctgaagctctggctatttcataaacagcttgaatgcaattcaccctag 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
