Query= MSMg01no459_l05.b1 MSMg01no459_l05.b1 CHROMAT_FILE:
MSMg01no459_l05.b1 PHD_FILE: MSMg01no459_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:43 2005
(368 letters)
>mm_chr10_22723004_22723771
Length = 768
Score = 609 bits (315), Expect = e-179
Identities = 360/387 (93%), Gaps = 19/387 (4%)
Strand = Plus / Minus
Query: 1 tttagagagatgactcaagtcattagaatgctggctgtacaagcctgaaaacccagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttagagagatgactcaagtcattagaatgctggctgtacaagcctgaaaacccagattc 499
Query: 61 aatcctaacacacatacacacaca-------------------cacacattttaaaattt 101
|||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 498 aatcctaacacacacacacacacacacacacacacacacaccccacacattttaaaattt 439
Query: 102 cagttccttaaagtttttgttactttatgccagctttaatgagtagacagagacagcagt 161
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 438 cagttccttaaagtttttgttactttatgctagctttaatgagtagacagagacagcagt 379
Query: 162 gccatttgcatcataaaaaactattcaagggctgtgcatataaaaagcacaaagctacta 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 accatttgcatcataaaaaactattcaagggctgtgcatataaaaagcacaaagctactg 319
Query: 222 cattttcttttattataattagtgtgtcttatataataataaaaatatactgctcatgtg 281
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 318 cattttcttttattataattagtgtgtcttagagaagaataaaaatatactgctcatgtg 259
Query: 282 ctgtaagaaaaataaatcacacattccacttaataaataaaaaaaccaaagcaggtttta 341
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgtaagaaaaataaatcaaacattccacttaataaataaaaaaaccaaagcaggtttta 199
Query: 342 atgttgtatatagctaaaaagtcaatg 368
|||||||||||||||||||||||||||
Sbjct: 198 atgttgtatatagctaaaaagtcaatg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_l05.g1 MSMg01no459_l05.g1 CHROMAT_FILE:
MSMg01no459_l05.g1 PHD_FILE: MSMg01no459_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:43 2005
(374 letters)
>mm_chr10_22531868_22532641
Length = 774
Score = 708 bits (366), Expect = 0.0
Identities = 372/374 (99%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 1 actgtagacaagaatgggaaggtctcacagaagagagggctgaggacatttcttcaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtagacaagaatgggaaggtctcacagaagagagggctgaggacatttcttcaacgc 260
Query: 61 actctcagtgatttggtccaatttaagcatctcaaacacgtaatagccatctttgatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actctcagtgatttggtccaatttaagcatctcaaacacgtaatagccatctttgatttc 320
Query: 121 ttacataattaggggacatcaatatcattctttcaggtacttttgtgactgaattttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacataattaggggacatcaatatcattctttcaggtacttttgtgactgaattttcaa 380
Query: 181 atggctggccaatatttttttttttcattttgaaacaggatctctgtattgtgcagctct 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 atggctggccaatatttttttttt-cattttgaaacaggatctctgtattgtgcagctct 439
Query: 241 gaacttgctatgtagaccagaccagcctggcctcaaactacaaagatacagctgcttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaacttgctatgtagaccagaccagcctggcctcaaactacaaagatacagctgcttctg 499
Query: 301 agagtgaagcacgaaccaccacgcccaactcccacgtttgtaatataaagtccagaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agagtgaagcacgaaccaccacgcccaactcccacgtttgtaatataaagtccagaaacc 559
Query: 361 ggcagaaacaggct 374
|||||||||||||
Sbjct: 560 agcagaaacaggct 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
