Query= MSMg01no459_l18.b1 MSMg01no459_l18.b1 CHROMAT_FILE:
MSMg01no459_l18.b1 PHD_FILE: MSMg01no459_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:46 2005
(249 letters)
>mm_chr10_8283456_8284104
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Plus
Query: 1 ccactcattacagcagagccttaaggacttaattgtcttggcaatgctacccagtcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccactcattacagcagagccttaaggacttaattgtcttggcaatgctacccagtcacag 260
Query: 61 tctgaactctgctttttgtctcctggatgtttctcttcctcatctgcctcagacacattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgaactctgctttttgtctcctggatgtttctcttcctcatctgcctcagacacattt 320
Query: 121 cttccttgttggtgataggaggagctgcgggaagacccatgtccttctcaggatagagat 180
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 cttccttgttggtgataagaggagctgcaggaagacccatgtccttctcaggatagagat 380
Query: 181 tgagaatctcaggagaattccatccacccatgctttgttccatactatggtctacctagt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tgagaatctcaggagaattccatccacccatgttttgttccatactatggtctacctagt 440
Query: 241 ctctagcct 249
|||||||||
Sbjct: 441 ctctagcct 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no459_l18.g1 MSMg01no459_l18.g1 CHROMAT_FILE:
MSMg01no459_l18.g1 PHD_FILE: MSMg01no459_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:46 2005
(402 letters)
>mm_chr10_8473436_8474237
Length = 802
Score = 723 bits (374), Expect = 0.0
Identities = 395/402 (98%)
Strand = Plus / Minus
Query: 1 tttatctggtcttcctttcctgtgttgactttccaagtatatcctgacatgacagcccta 60
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 602 tttatctggtcttcctctcctgtgttgactttccaagtatagcctgacatgacagcccta 543
Query: 61 gatgatattaaacgtgggcaatatctttgtctgtcatctgcccacttctgtgtgtccggc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 542 gatgatattaaacgtgggcaatgtctttgtctgtcatctgcccacttctgtgtgtccggc 483
Query: 121 cgcatctccgcagtgcaccagcacttctaagccagtacaggatcatcagcttctatgtgg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgcatctctgcagtgcaccagcacttctaagccagtacaggatcatcagcttctatgtgg 423
Query: 181 tgccttttagcacaagaagaagcttcaagtgtctcttttttattaacttaacacccactg 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 422 tgccttttagcacaagaagaagcttcaactgtctcttttttattaacttaacacccactg 363
Query: 241 tatctgtatggggcattagctaaagatcagtaggtgttgtgacagacacggctcggagcc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 taactgtatggggcattagctaaagatcagtaggtgttgtgacagacacggctcggagcc 303
Query: 301 ggaaccagacgcccaaggtcctggagctatggctgaagaccagaatttgtacaaagctgt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 302 ggaaccagacgcccaaggtcctggagctatggctgaagaacagaatttgtacaaagctgt 243
Query: 361 atcctcgggtgaagtggtctcatgtcctcacttctccttggg 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atcctcgggtgaagtggtctcatgtcctcacttctccttggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
