XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAA
GTTAGTTTTTCATTTAATCTTCTGTGTGCTTCAGCCATAAAATACAGTTC
ATTTAAAGGCCTCTTTGTTGTTTCACTTCATTTATTTGGCATAATAGCAA
TAAATGTTCTATTTTGTGTGTTTTGCAATAGTGAAACAGCTCCCAGGTCT
ACAATAAAGCCAGAGGAGTTTATTACTTTGCAATGGCTTCTTGTGCCTGT
GGAAAATTTACCGAAAGGGTCATTACTTAATGTATTAATACTTGATAATG
TCACATTACCATTTTCTACCATGTAGGAGTATTTTATTACTTCACAATAG
AGCCCAAATTAACTCTAGCATATATGTGTGTGTGTGTATTCATATATGCA
TATGTATATGTTCATATATATGTATAATGAACATATGATGTGATATGAGG
AAATCAGTTTAGTTCACATGGTACATACATAGGATTTATTTTTGTACTCA
TCTTTATTTATGTCATCAAGGTTTATATCTGTCTATTTTTATCCAAAAAA
ATAAAACCTGTTGGACCACATATGTTTATATCCTATCAAGCGAGGCTACT
TGAAACATTAATTATTACAATAATTTAAAGTTATTGCTTAAATTAAGATA
TATAATTTCCTAATGACTAATCTGCATCTCTCCTTCCTTGAGGCACATTT
TATTGCTATCCACTTTCACN

GGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGTTTAGTTCTATATCCCACTTTTTGATTGG
ATTGGTTGGTTTTGTGGGATGCCAGATTCTTCAGTTCTTTATATATTTGG
ATATTAGGCATCTATCGGATGTGGGGTTATGGAAGATATTTTCCCAATTT
GTAGGTTGCTGATTTGTACCATCGACTATGTCCTTTGCCTTACAGATTTT
CAGTTTCATGAGTTCCCATATATCAATTCTGGGTCTTAGAGTCTTAGCCA
TTGGTTTTCTGTTTAGGAAATCCCCCCCTCCCGTGCCAAAGTTCAAAGTT
CTTTCACACTTTCTCTTTTAGTAGATTTAGTATATCTGGCTTTATAATGA
GGTCCTTGATCCACTTGGACTTGAGTTTATGCAAGTTGATAGATATAGAT
CTATTTTCATTTTTCTATGTACACACTACCAGCTAGACTAGGACTATGTA
TTAGAGATTTTTTTATTGTTTATTTTTGGCTTCTTTGAAAAATACCAAAT
GTCTGGAACTATGTGTTCTTATATCTGTGGCCTCAATTCTATTTCATTGA
GTAACCTGTCTCTGGACAAATAACATTTCTGGGTTTTGGTTTGGTTTCGT
TTGAGCAATGTTCTGTAGCTCATATTGCTGTCCGGTTTGGCGCCCCCCGC
CACATCATTTTTCCCGTCATTTTT

Query= MSMg01no460_g18.b1 MSMg01no460_g18.b1 CHROMAT_FILE:
MSMg01no460_g18.b1 PHD_FILE: MSMg01no460_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:40 2005
         (553 letters)



>mm_chr10_48379248_48380200
          Length = 953

 Score =  899 bits (465), Expect = 0.0
 Identities = 501/517 (96%), Gaps = 10/517 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcatttaatcttctgtgtgcttcagccataaaatacagttcatttaaaggcctctttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttcatttaatcttctgtgtgcttcagccataaaatacagttcatttaaaggcctctttg 453

                                                                       
Query: 61  ttgtttcacttcatttatttggcataatagcaataaatgttctattttgtgtgttttgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttgtttcacttcatttatttggcataatagcaataaatgttctattttgtgtgttttgca 393

                                                                       
Query: 121 atagtgaaacagctcccaggtctacaataaagccagaggagtttattactttgcaatggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atagtgaaacagctcccaggtctacaataaagccagaggagtttattactttgcaatggc 333

                                                                       
Query: 181 ttcttgtgcctgtggaaaatttaccgaaagggtcattacttaatgtattaatacttgata 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttcttgtgcctgtggaaaattgaccgaaagggtcattacttaatgtattaatacttgata 273

                                                                       
Query: 241 atgtcacattaccattttctaccatgtaggagtattttattacttcacaatagagcccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgtcacattaccattttctaccatgtaggagtattttattacttcacaatagagcccaa 213

                                                                       
Query: 301 attaactctagcatata----tgtgtgtgtgtgtattcatatatgcatatgtatatgttc 356
           |||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||
Sbjct: 212 attaactctagcatatatgtgtgtgtgtgtgtgtattcatatatgcatatgtatattttc 153

                                                                       
Query: 357 atatatatgtataatgaacatatgatgtgatatgaggaaatcagtttagttcacatggta 416
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 152 atatatatgtataatgaacatatgatgtgatatgaagaaatcagtttagttcacatgata 93

                                                                       
Query: 417 catacataggatttatt-tttgtactcatctttatttatgtcatcaaggtttatatctgt 475
           ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 92  catacgtaggatttattctttgtactcatctttatttatgtcatcaagctttatatctgt 33

                                                
Query: 476 ctatttttatccaaaaaaataaaacctgttggaccac 512
           |||||||||| |||||    |||||||||||||||||
Sbjct: 32  ctatttttat-caaaa----aaaacctgttggaccac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)